Click here to switch to the map view.

The map label for this gene is pgpB [H]

Identifier: 209695464

GI number: 209695464

Start: 2148918

End: 2149679

Strand: Reverse

Name: pgpB [H]

Synonym: VSAL_I2007

Alternate gene names: 209695464

Gene position: 2149679-2148918 (Counterclockwise)

Preceding gene: 209695465

Following gene: 209695462

Centisome position: 64.65

GC content: 38.19

Gene sequence:

>762_bases
ATGACACTTAATTTTATGAAACAATTTACTATGTTATTTTCATTTTCACCTAAAAACCGTATTTACGAACTCGTTGCTTT
CTTTCTGTTTATTGCAGCGATGCTGTTGGTTATTTTGATTATTCCAACACCCAATTTATTTGACCCAATGTCAGAGATAG
CAAATAGTCTTCTTAGCTTGTTAAGTCGTTCTGCCGGTCATCCTCTTTTTATCGTCACTTCGGCAATACTTTGTTGCTTA
CCTATTATTAAGCGCATGCCTTTCAAGAAGATATTGTCCCTCTATCTTCAATTTGCCATCTTATTAGTACTTAGCTTAAT
ACTTAAAACCAGTGTTAAAGCCATCACTGAGATCCCTCGTCCTTTTACTCAAGCATTAACACAAGTCAGTGTCGTTGAAA
GCCCTGATGCGTTTTACTTATTAAAAGAACAAGATAAACAAGATATGATCTCAATGGTTGAAACGCTTGTTAGCCCAGCT
CGTATTGATCAATGGCGTCAAGGTACGAATTATTCATTCCCATCGGGTCATACTATTTTTGCCGCTATCTGTGTTTTATT
CTGGGGTGGCTTTTTACTTCGTCATAAGCACTATGTACTAACTGCGGCAGTGATCAGCTGGGGAGTTGGTGTCGGTTTAA
GTCGCTTATGGCTTGGAATGCATTGGCCAACAGATCTCATGGCGTCCATCATCAGCGCATCGATTTTGATTCTTTGTGTG
CCAACAATAAATTTAGAAAAAGAACCCATCGACAAAAACTAA

Upstream 100 bases:

>100_bases
TAATTGTAATCTTTTGTTACATTATGGAGTAATAACTCTACTCATTATCCGTTTTTTCTACATTTATTGTGCCCATAGAG
CGTGCAAGCAAGGTACACTA

Downstream 100 bases:

>100_bases
GATTCTATTTCGCAAAGAATGTTCCACACTTTCTCTCCTGCGGGATGCAATCTCGCTTGATAGCGATAAGCATAGTATTC
AATTGGAAGTCGTAATGATT

Product: phosphatidylglycerophosphatase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTLNFMKQFTMLFSFSPKNRIYELVAFFLFIAAMLLVILIIPTPNLFDPMSEIANSLLSLLSRSAGHPLFIVTSAILCCL
PIIKRMPFKKILSLYLQFAILLVLSLILKTSVKAITEIPRPFTQALTQVSVVESPDAFYLLKEQDKQDMISMVETLVSPA
RIDQWRQGTNYSFPSGHTIFAAICVLFWGGFLLRHKHYVLTAAVISWGVGVGLSRLWLGMHWPTDLMASIISASILILCV
PTINLEKEPIDKN

Sequences:

>Translated_253_residues
MTLNFMKQFTMLFSFSPKNRIYELVAFFLFIAAMLLVILIIPTPNLFDPMSEIANSLLSLLSRSAGHPLFIVTSAILCCL
PIIKRMPFKKILSLYLQFAILLVLSLILKTSVKAITEIPRPFTQALTQVSVVESPDAFYLLKEQDKQDMISMVETLVSPA
RIDQWRQGTNYSFPSGHTIFAAICVLFWGGFLLRHKHYVLTAAVISWGVGVGLSRLWLGMHWPTDLMASIISASILILCV
PTINLEKEPIDKN
>Mature_252_residues
TLNFMKQFTMLFSFSPKNRIYELVAFFLFIAAMLLVILIIPTPNLFDPMSEIANSLLSLLSRSAGHPLFIVTSAILCCLP
IIKRMPFKKILSLYLQFAILLVLSLILKTSVKAITEIPRPFTQALTQVSVVESPDAFYLLKEQDKQDMISMVETLVSPAR
IDQWRQGTNYSFPSGHTIFAAICVLFWGGFLLRHKHYVLTAAVISWGVGVGLSRLWLGMHWPTDLMASIISASILILCVP
TINLEKEPIDKN

Specific function: Hydrolyzes phosphatidylglycerophosphate, phosphatidic acid, and lysophosphatidic acid; the pattern of activities varies according to subcellular location [H]

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Cell outer membrane; Multi-pass membrane protein (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787534, Length=159, Percent_Identity=33.9622641509434, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326 [H]

Pfam domain/function: PF01569 PAP2 [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 28466; Mature: 28334

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCC
>Mature Secondary Structure 
TLNFMKQFTMLFSFSPKNRIYELVAFFLFIAAMLLVILIIPTPNLFDPMSEIANSLLSL
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LSRSAGHPLFIVTSAILCCLPIIKRMPFKKILSLYLQFAILLVLSLILKTSVKAITEIPR
HHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFTQALTQVSVVESPDAFYLLKEQDKQDMISMVETLVSPARIDQWRQGTNYSFPSGHTIF
HHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHH
AAICVLFWGGFLLRHKHYVLTAAVISWGVGVGLSRLWLGMHWPTDLMASIISASILILCV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
PTINLEKEPIDKN
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]