Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695450

Identifier: 209695450

GI number: 209695450

Start: 2133986

End: 2134339

Strand: Reverse

Name: 209695450

Synonym: VSAL_I1991

Alternate gene names: NA

Gene position: 2134339-2133986 (Counterclockwise)

Preceding gene: 209695454

Following gene: 209695443

Centisome position: 64.19

GC content: 32.49

Gene sequence:

>354_bases
GTGAAAATATCAGAACTTATACAAGTTTTACAAACAATCCAAGAAACAACAAGTGATGACTTAGAAGTTGTGACTGGCGA
AGAATGGTTTCCAGAACAATTACTTGAATCTAATGTAAATCACAACATGGCTTTTTTAAAGTTTGACCGTATGCCAAATG
ATATTCCGAGCGAAATTGATGCCAGAGGTTTTTTTGAGCATGAAGAATTACTTATTAAAAATATAATCAATAAAGTAATT
TTCAGTGAATTAGAACCCGAAGAGATGGTAGAAAAACTAGCTACGATGCTTTTTTTCAGCCACGAAAATATCAGCTCTGA
TGTCATTGAAGCCTTTAGCCAAGAAATAAAATAA

Upstream 100 bases:

>100_bases
GGGATAAGATAACCAATTGATATAATATTATTTCAATCAACTGTAGATTTTCAGTATAGTGTCGATAACGTTTATAGTAA
TCAAAGTCTTGAGAAAAAAT

Downstream 100 bases:

>100_bases
TTATCATCGGCCAAATTCAATAATAAAAAAGTAGGTACTGAGCCTACTTTTTTATTATCTACGCTACATAGTGACTAGAA
TGGATACCAGAATAACGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKISELIQVLQTIQETTSDDLEVVTGEEWFPEQLLESNVNHNMAFLKFDRMPNDIPSEIDARGFFEHEELLIKNIINKVI
FSELEPEEMVEKLATMLFFSHENISSDVIEAFSQEIK

Sequences:

>Translated_117_residues
MKISELIQVLQTIQETTSDDLEVVTGEEWFPEQLLESNVNHNMAFLKFDRMPNDIPSEIDARGFFEHEELLIKNIINKVI
FSELEPEEMVEKLATMLFFSHENISSDVIEAFSQEIK
>Mature_117_residues
MKISELIQVLQTIQETTSDDLEVVTGEEWFPEQLLESNVNHNMAFLKFDRMPNDIPSEIDARGFFEHEELLIKNIINKVI
FSELEPEEMVEKLATMLFFSHENISSDVIEAFSQEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13634; Mature: 13634

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISELIQVLQTIQETTSDDLEVVTGEEWFPEQLLESNVNHNMAFLKFDRMPNDIPSEID
CCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHH
ARGFFEHEELLIKNIINKVIFSELEPEEMVEKLATMLFFSHENISSDVIEAFSQEIK
HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKISELIQVLQTIQETTSDDLEVVTGEEWFPEQLLESNVNHNMAFLKFDRMPNDIPSEID
CCHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHH
ARGFFEHEELLIKNIINKVIFSELEPEEMVEKLATMLFFSHENISSDVIEAFSQEIK
HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA