The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is 209695270

Identifier: 209695270

GI number: 209695270

Start: 1916221

End: 1916967

Strand: Reverse

Name: 209695270

Synonym: VSAL_I1795

Alternate gene names: NA

Gene position: 1916967-1916221 (Counterclockwise)

Preceding gene: 209695273

Following gene: 209695268

Centisome position: 57.65

GC content: 36.55

Gene sequence:

>747_bases
GTGAGTGTAGAAAATAAAAACAATAATGAAACTGAGCACGATGATGAGGTAATAATCATTGAAGAGAAATCTAAATCAAG
CCATTGGGTTGCTGGCGTAACGTTAGTGATTGGCTTGATTGCGGGTGGATTAATTGGTTCAAGTGTTTCTGATAACAAAT
GGTCAGAGACTTACACTCAACTCGAATCTCAATCAAAAGACTATCAAGGTCAATTAAAAGACGCGAGCACGAAAAGTGCC
GAAGTTGATGTGTTGATTGCACAAGAAAAACAAAAAGCGTTAGAAGCACAAAAACAAGAATTAGACGAGCAAAAAGCACA
AGCAGTCGCTGAAGAAGCAAAGAAATACACGGCATTAAACAAAGAAGTGAAAACGCTTAAATCGAAGAAAACCTCTTTAT
TTATGCAAGTTGAAGAGCAGAATAAACAAATTGACCAATTAACAAATCAAGTTGATCTGCAAGTCACAATGCTAACGCGT
TCGAAACAGCTTTTTCAACGTCAACTGCAGTTGAAAGAAGAAGCGGGTGATTTACAGGTTAAGATTGATGTCATTAGTGG
TAATGAGAAGAAACTCGCGAAAGACTGTGCTGTTTACCTTGAAGGTAAAAGCTGGGACGCAAAATCTGATGTGTGTAAAA
AGCAAGAGAAAGCAAATAAACAAATTTCTCAATTGAAAGACGAACTGCAATTACTGCAAATGGACATTAAAGAAATTGAT
AGTATTAGTGAAAGTATTGGTATGTGA

Upstream 100 bases:

>100_bases
TCATGATTAGTGAATTGATTCGGTAAATTGTCTTGTCATTAACACAAAGTGTGGTGTTTATAGCTACACTAGAAAAATAT
CCATTGTTCGAGGTTAGCGC

Downstream 100 bases:

>100_bases
TTCACTTCGGTACCACTAATGCTACTGACGCATAGAAACCACAGTTGCTGTGGTTTTTTTGTATCGTAAATTTGAGATGA
GAATGACTTGCATTTAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSVENKNNNETEHDDEVIIIEEKSKSSHWVAGVTLVIGLIAGGLIGSSVSDNKWSETYTQLESQSKDYQGQLKDASTKSA
EVDVLIAQEKQKALEAQKQELDEQKAQAVAEEAKKYTALNKEVKTLKSKKTSLFMQVEEQNKQIDQLTNQVDLQVTMLTR
SKQLFQRQLQLKEEAGDLQVKIDVISGNEKKLAKDCAVYLEGKSWDAKSDVCKKQEKANKQISQLKDELQLLQMDIKEID
SISESIGM

Sequences:

>Translated_248_residues
MSVENKNNNETEHDDEVIIIEEKSKSSHWVAGVTLVIGLIAGGLIGSSVSDNKWSETYTQLESQSKDYQGQLKDASTKSA
EVDVLIAQEKQKALEAQKQELDEQKAQAVAEEAKKYTALNKEVKTLKSKKTSLFMQVEEQNKQIDQLTNQVDLQVTMLTR
SKQLFQRQLQLKEEAGDLQVKIDVISGNEKKLAKDCAVYLEGKSWDAKSDVCKKQEKANKQISQLKDELQLLQMDIKEID
SISESIGM
>Mature_247_residues
SVENKNNNETEHDDEVIIIEEKSKSSHWVAGVTLVIGLIAGGLIGSSVSDNKWSETYTQLESQSKDYQGQLKDASTKSAE
VDVLIAQEKQKALEAQKQELDEQKAQAVAEEAKKYTALNKEVKTLKSKKTSLFMQVEEQNKQIDQLTNQVDLQVTMLTRS
KQLFQRQLQLKEEAGDLQVKIDVISGNEKKLAKDCAVYLEGKSWDAKSDVCKKQEKANKQISQLKDELQLLQMDIKEIDS
ISESIGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27894; Mature: 27763

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVENKNNNETEHDDEVIIIEEKSKSSHWVAGVTLVIGLIAGGLIGSSVSDNKWSETYTQ
CCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LESQSKDYQGQLKDASTKSAEVDVLIAQEKQKALEAQKQELDEQKAQAVAEEAKKYTALN
HHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVKTLKSKKTSLFMQVEEQNKQIDQLTNQVDLQVTMLTRSKQLFQRQLQLKEEAGDLQV
HHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHCCCCEEE
KIDVISGNEKKLAKDCAVYLEGKSWDAKSDVCKKQEKANKQISQLKDELQLLQMDIKEID
EEEEECCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISESIGM
HHHHHHCC
>Mature Secondary Structure 
SVENKNNNETEHDDEVIIIEEKSKSSHWVAGVTLVIGLIAGGLIGSSVSDNKWSETYTQ
CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LESQSKDYQGQLKDASTKSAEVDVLIAQEKQKALEAQKQELDEQKAQAVAEEAKKYTALN
HHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVKTLKSKKTSLFMQVEEQNKQIDQLTNQVDLQVTMLTRSKQLFQRQLQLKEEAGDLQV
HHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHCCCCEEE
KIDVISGNEKKLAKDCAVYLEGKSWDAKSDVCKKQEKANKQISQLKDELQLLQMDIKEID
EEEEECCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SISESIGM
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA