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The map label for this gene is hrpA [H]

Identifier: 209695193

GI number: 209695193

Start: 1795434

End: 1799330

Strand: Reverse

Name: hrpA [H]

Synonym: VSAL_I1700

Alternate gene names: 209695193

Gene position: 1799330-1795434 (Counterclockwise)

Preceding gene: 209695195

Following gene: 209695192

Centisome position: 54.11

GC content: 41.08

Gene sequence:

>3897_bases
TTGAGTCAATCAAATCAAAACTCAGCAGGTGCACTTAGAAAAGCACTGAGTGAATGTATGATCCGTGATCGTTTCCGCCT
AAGCAAACGCATTCAAGGCGCATCACGCATTAAAAATGAAGAAGCAAGAAATGCGGTGTTTGATGAAATCGCATTAGACA
TCGCAAAATCAATGCAAATCGCGAATAACCGCGAAATGGATCGCCCAACAATCCAGTACCCAGAACAATTGCCAGTCAGT
CAGAAAAAAGATGACATTGCTGAAGCGATTGCAAATAACCAAGTAGTTATTGTTGCCGGTGAAACCGGTTCGGGTAAAAC
CACTCAGTTACCAAAGATTTGTTTGGAATTAGGTCGTGGTAAGTTTGGTAATATTGGTCACACTCAGCCACGTCGCTTAG
CGGCACGTTCGGTTGCGGATCGCATTGCCGAAGAAATGGAAACAGAGCTTGGTAGCCATGTTGGTTATAAAGTTCGATTC
AACGATAAAGTATCAGAGCGTACGCAAGTTAAATTGATGACTGACGGTATCTTACTTGCTGAGATTCAAAGTGATCGTTA
TTTAAATCAATACGATACGATTATTATCGATGAAGCGCATGAGCGTAGTTTAAACATCGATTTTATCATGGGCTATTTAC
GTGAATTATTGCCAAAACGCCCAGATTTAAAAATCATCATTACGTCAGCAACCATTGATCCAGAACGCTTTTCAAAACAT
TTTAACAATGCACCTATCATTGAAGTATCGGGCCGAACCTTCCCTGTAGAAACTCGTTACCGTCCCATCGTTGAAGACGG
AGATGATACTGACAGAGATCAATTAGAAGGCATTTTTGATGCAGTTGATGAACTGTGTGCAGAAGGGCTAGGGGACATTC
TCTTGTTTATGACGGGTGAGCGAGATATTCGTGATACCGCAGAAGCGTTAGAGAAACGTAACTTACGAGACACTGAAATT
GTGCCTCTATACGCACGTTTGTCTTCTCAAGAGCAAAATCGAGTTTTCCAGTCTCATGCTGGTCGTCGAATTGTATTGGC
AACCAACGTGGCAGAAACGTCGTTAACCGTTCCTGGTATCAAGTATGTCATTGACCCAGGTACGGCGCGTATTAGTCGCT
ATAGTTATCGAACTAAAGTTCAGCGCTTGCCGATTGAAGCGATCTCTCAAGCCAGTGCGAATCAGCGTAAAGGTCGTTGT
GGTCGTGTGTCGGAAGGTGTGTGTATTCGTCTGTATTCAGAGGAAGACTTTGTTGCTCGCCCTGAATTCACCGATCCTGA
AATTTTACGAACTAACTTAGCCTCTGTTATTTTACAAATGACGGCATTAGGTTTAGGCGACATTCAAGCATTCCCATTTG
TAGAAGCGCCTGATAATCGAAATATTCAAGATGGTGTGAAACTCCTTGAAGAGCTAGGTGCGATTAATGCTGAGATAAGT
GATCCTAAAAAACGCTTAACGAAAGTTGGTCGTGAATTGGCGCGTTTGCCTATCGATCCACGTTTGGCTCGAATGGTACT
TGAAGCGCCGAATCAAAATGCATTGCAAGAAGTGATGATCATTGCGGCGGCACTATCGATTCAAGATCCACGAGAGCGTC
CAAGTGATAAGAAACAAGCGTCGGATGAAAAGCACAAACGTTTTAATCATGAAGATTCTGATTTCTTAACATTTGTAAAT
ATTTGGCAGTATGTAAAAGAGCAACAGAAAGAGCTATCTAGCAACTCGTTTAGAAAGCAATGTCGCAAAGATTACTTAAA
CTATTTACGTATTCGTGAATGGCAAGATGTGCATTATCAATTAACTCAAGTAATGAAAGAGCTTAATTATAAAGTGAATC
AAGAGGCTGCAGGGTATCAAGGCGTTCATACGGCTATTTTAGCTGGCATGCTTTCTCATATTGGTCAAAAAGATCAAGAG
AAGAATGAATACCAAGGTGCACGTAATGCACGCTTCCATATATTCCCAGGATCTGGTTTATTTAAAAAGCAGCCTAAATG
GGCAATGGTGGCAGAGCTAGTTGAAACTTCAAAGTTATGGGGTCGAATTGTTGCAAAAATTCAACCTGAATGGATTGAAC
CTCTAGCACCACATTTAATTAAACGCAGTTACAGCGAGCCACATTGGTCGAAAAAATCTGCCGCAGTTATGGCGTATGAG
AAAGTGACTATTTACGGCATTCCAATTGTCGTGAAGCGTCAAATTAACTACGGTACGATTGATGCGCCAGTGTGTCGTGA
AATCTTTATTCGCTCAGCGTTAGTTGAAGGGGATTGGAATACGAATCATAAGTTCTTTAAGCAGAACCGTAAATTGTTGC
AAGAAGTTGAAGAGCTAGAGCATAAATCTCGTCGTCGCGATCTATTGATTGATGATGATCAGCTTGCCGAATTTTATGAC
CAACGAGTAAATACGGATGTGGTTTCTGGCCGCCATTTTGACTCGTGGTGGAAAACCGCCCAAAAAGAGACACCAGATTT
ACTTAATTTTGAAAAAGAGATGTTGTTCCGCAATGATGCAAGTCATGTGACGGATCTTGATTATCCAAATTTCTGGCATC
AAGGTAACCTAAAGCTGAAGTTAAGCTATCAATTTGAACCGGGGCAAGATAGTGACGGTGTCACGGTTCACGTGCCATTA
CCGATTTTAAATCAAGTGACGACCGAAGGGTTTGATTGGCAGATCCCCGGTTTACGTCATGAAATGATCGTTGCTTATAT
TAAATCGTTACCAAAAACACTTCGTCGTAACTTTGTGCCTGCGCCAAATTATGCTGATGCATTTTTATCACGTATAACAC
CATTTGATATGCCATTACTCGACAGCCTTGAAAAAGAGCTGCGTAGAATGACGGGTGTTGCTGTATTGCGTGAAGATTGG
AAACTAGAACAAATCCCTGATCACTTGAAGGTGACTTACAGAGTGGTTGATCACCATAACCGTAAGTTAAAAGAAAGCCG
TGATCTTTACGATTTAAAAGATGGCTTAAAAGATAAAGTACAAGAAACGTTATCTCAGGTCGCTGATGACGATATTGAGC
AAGCGGGTTTAAAAACGTGGAGCTTTGGTGAACTACCTGCACTTTATACTCAGAAACGTGGTGGCTTTGAAGTTAAGGCG
TATCCTGCGATTGTAGATAGTAAAGACAGTGTTGGGATTAAGTTGTTTGAAACAGAAGAAGAACAACATAATGCAATGAA
AGCAGGGCAACGCCGATTGATCTTGTTGAATGTTCCGTCACCGATTAAATATTTACGTGACAACTTGCCAAACAAGTCAA
AATTAGGCCTATACTTCAATCAGTATGGTCGAGTCTTGGACTTAATTGATGATTGTATTGCGTGTGGCGTTGATAAATTA
ATTGACGATAAAGGTGGCCTTGTTTGGGAACCTGAAGCGTTTGATAATATGAAAGAACACATTCGAGCGGAACTGGGCGA
TACGGTTGTGGAGATCGCTAAATTAGTCGAAACGATTTTAACGACGGCTTTCCAAATACAGAAGAAGCTAAAAGGTCGTG
TTGATCTAAGTATGGCGTTTGCGTTGTCTGATATTAAATCTCAAATTGAAAACCTGATTTTTAAAGGTTTTGCAACAGAA
TGTGGTTGGAAGAGATTGACGGATATCCATCGTTATATGAAAGCGATCGAACGTCGAATGGAGAAGTTACCGATTGATCC
AACTCGAGATCGTGCTCATTTATTGAAAGTTGACAGTGTTAACAATGAATACAAAGAATTGTTAAACAAGATCCCGAAAG
GGCAGCCAATACCCGATAAAGTAAAAGACATTCGTTGGATGATAGAAGAGCTTAGAGTAAGTTATTTTGCTCAACAACTT
GGTACACCATACCCTGTTTCGGACAAACGAGTGAAAAACGCCATTGCTGATTGTTAG

Upstream 100 bases:

>100_bases
CATTTATCACATTTTTATAAAAGTAATCAAAATCTTGTTCTTAAAAAGAATGTGATAGAATCCTTACAGTTAATGAATAC
CAGATTCAGTAGGATATATT

Downstream 100 bases:

>100_bases
TGTATAGAATAATATATAACAATATCGGCATACAATTTGCTTTAGTATGATTAATATTAAAAAGAGCGGCAAAGATTGCC
GCTCCCTTTTGAAAATAGGA

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1298; Mature: 1297

Protein sequence:

>1298_residues
MSQSNQNSAGALRKALSECMIRDRFRLSKRIQGASRIKNEEARNAVFDEIALDIAKSMQIANNREMDRPTIQYPEQLPVS
QKKDDIAEAIANNQVVIVAGETGSGKTTQLPKICLELGRGKFGNIGHTQPRRLAARSVADRIAEEMETELGSHVGYKVRF
NDKVSERTQVKLMTDGILLAEIQSDRYLNQYDTIIIDEAHERSLNIDFIMGYLRELLPKRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTFPVETRYRPIVEDGDDTDRDQLEGIFDAVDELCAEGLGDILLFMTGERDIRDTAEALEKRNLRDTEI
VPLYARLSSQEQNRVFQSHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEAISQASANQRKGRC
GRVSEGVCIRLYSEEDFVARPEFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDNRNIQDGVKLLEELGAINAEIS
DPKKRLTKVGRELARLPIDPRLARMVLEAPNQNALQEVMIIAAALSIQDPRERPSDKKQASDEKHKRFNHEDSDFLTFVN
IWQYVKEQQKELSSNSFRKQCRKDYLNYLRIREWQDVHYQLTQVMKELNYKVNQEAAGYQGVHTAILAGMLSHIGQKDQE
KNEYQGARNARFHIFPGSGLFKKQPKWAMVAELVETSKLWGRIVAKIQPEWIEPLAPHLIKRSYSEPHWSKKSAAVMAYE
KVTIYGIPIVVKRQINYGTIDAPVCREIFIRSALVEGDWNTNHKFFKQNRKLLQEVEELEHKSRRRDLLIDDDQLAEFYD
QRVNTDVVSGRHFDSWWKTAQKETPDLLNFEKEMLFRNDASHVTDLDYPNFWHQGNLKLKLSYQFEPGQDSDGVTVHVPL
PILNQVTTEGFDWQIPGLRHEMIVAYIKSLPKTLRRNFVPAPNYADAFLSRITPFDMPLLDSLEKELRRMTGVAVLREDW
KLEQIPDHLKVTYRVVDHHNRKLKESRDLYDLKDGLKDKVQETLSQVADDDIEQAGLKTWSFGELPALYTQKRGGFEVKA
YPAIVDSKDSVGIKLFETEEEQHNAMKAGQRRLILLNVPSPIKYLRDNLPNKSKLGLYFNQYGRVLDLIDDCIACGVDKL
IDDKGGLVWEPEAFDNMKEHIRAELGDTVVEIAKLVETILTTAFQIQKKLKGRVDLSMAFALSDIKSQIENLIFKGFATE
CGWKRLTDIHRYMKAIERRMEKLPIDPTRDRAHLLKVDSVNNEYKELLNKIPKGQPIPDKVKDIRWMIEELRVSYFAQQL
GTPYPVSDKRVKNAIADC

Sequences:

>Translated_1298_residues
MSQSNQNSAGALRKALSECMIRDRFRLSKRIQGASRIKNEEARNAVFDEIALDIAKSMQIANNREMDRPTIQYPEQLPVS
QKKDDIAEAIANNQVVIVAGETGSGKTTQLPKICLELGRGKFGNIGHTQPRRLAARSVADRIAEEMETELGSHVGYKVRF
NDKVSERTQVKLMTDGILLAEIQSDRYLNQYDTIIIDEAHERSLNIDFIMGYLRELLPKRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTFPVETRYRPIVEDGDDTDRDQLEGIFDAVDELCAEGLGDILLFMTGERDIRDTAEALEKRNLRDTEI
VPLYARLSSQEQNRVFQSHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEAISQASANQRKGRC
GRVSEGVCIRLYSEEDFVARPEFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDNRNIQDGVKLLEELGAINAEIS
DPKKRLTKVGRELARLPIDPRLARMVLEAPNQNALQEVMIIAAALSIQDPRERPSDKKQASDEKHKRFNHEDSDFLTFVN
IWQYVKEQQKELSSNSFRKQCRKDYLNYLRIREWQDVHYQLTQVMKELNYKVNQEAAGYQGVHTAILAGMLSHIGQKDQE
KNEYQGARNARFHIFPGSGLFKKQPKWAMVAELVETSKLWGRIVAKIQPEWIEPLAPHLIKRSYSEPHWSKKSAAVMAYE
KVTIYGIPIVVKRQINYGTIDAPVCREIFIRSALVEGDWNTNHKFFKQNRKLLQEVEELEHKSRRRDLLIDDDQLAEFYD
QRVNTDVVSGRHFDSWWKTAQKETPDLLNFEKEMLFRNDASHVTDLDYPNFWHQGNLKLKLSYQFEPGQDSDGVTVHVPL
PILNQVTTEGFDWQIPGLRHEMIVAYIKSLPKTLRRNFVPAPNYADAFLSRITPFDMPLLDSLEKELRRMTGVAVLREDW
KLEQIPDHLKVTYRVVDHHNRKLKESRDLYDLKDGLKDKVQETLSQVADDDIEQAGLKTWSFGELPALYTQKRGGFEVKA
YPAIVDSKDSVGIKLFETEEEQHNAMKAGQRRLILLNVPSPIKYLRDNLPNKSKLGLYFNQYGRVLDLIDDCIACGVDKL
IDDKGGLVWEPEAFDNMKEHIRAELGDTVVEIAKLVETILTTAFQIQKKLKGRVDLSMAFALSDIKSQIENLIFKGFATE
CGWKRLTDIHRYMKAIERRMEKLPIDPTRDRAHLLKVDSVNNEYKELLNKIPKGQPIPDKVKDIRWMIEELRVSYFAQQL
GTPYPVSDKRVKNAIADC
>Mature_1297_residues
SQSNQNSAGALRKALSECMIRDRFRLSKRIQGASRIKNEEARNAVFDEIALDIAKSMQIANNREMDRPTIQYPEQLPVSQ
KKDDIAEAIANNQVVIVAGETGSGKTTQLPKICLELGRGKFGNIGHTQPRRLAARSVADRIAEEMETELGSHVGYKVRFN
DKVSERTQVKLMTDGILLAEIQSDRYLNQYDTIIIDEAHERSLNIDFIMGYLRELLPKRPDLKIIITSATIDPERFSKHF
NNAPIIEVSGRTFPVETRYRPIVEDGDDTDRDQLEGIFDAVDELCAEGLGDILLFMTGERDIRDTAEALEKRNLRDTEIV
PLYARLSSQEQNRVFQSHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEAISQASANQRKGRCG
RVSEGVCIRLYSEEDFVARPEFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDNRNIQDGVKLLEELGAINAEISD
PKKRLTKVGRELARLPIDPRLARMVLEAPNQNALQEVMIIAAALSIQDPRERPSDKKQASDEKHKRFNHEDSDFLTFVNI
WQYVKEQQKELSSNSFRKQCRKDYLNYLRIREWQDVHYQLTQVMKELNYKVNQEAAGYQGVHTAILAGMLSHIGQKDQEK
NEYQGARNARFHIFPGSGLFKKQPKWAMVAELVETSKLWGRIVAKIQPEWIEPLAPHLIKRSYSEPHWSKKSAAVMAYEK
VTIYGIPIVVKRQINYGTIDAPVCREIFIRSALVEGDWNTNHKFFKQNRKLLQEVEELEHKSRRRDLLIDDDQLAEFYDQ
RVNTDVVSGRHFDSWWKTAQKETPDLLNFEKEMLFRNDASHVTDLDYPNFWHQGNLKLKLSYQFEPGQDSDGVTVHVPLP
ILNQVTTEGFDWQIPGLRHEMIVAYIKSLPKTLRRNFVPAPNYADAFLSRITPFDMPLLDSLEKELRRMTGVAVLREDWK
LEQIPDHLKVTYRVVDHHNRKLKESRDLYDLKDGLKDKVQETLSQVADDDIEQAGLKTWSFGELPALYTQKRGGFEVKAY
PAIVDSKDSVGIKLFETEEEQHNAMKAGQRRLILLNVPSPIKYLRDNLPNKSKLGLYFNQYGRVLDLIDDCIACGVDKLI
DDKGGLVWEPEAFDNMKEHIRAELGDTVVEIAKLVETILTTAFQIQKKLKGRVDLSMAFALSDIKSQIENLIFKGFATEC
GWKRLTDIHRYMKAIERRMEKLPIDPTRDRAHLLKVDSVNNEYKELLNKIPKGQPIPDKVKDIRWMIEELRVSYFAQQLG
TPYPVSDKRVKNAIADC

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI68509926, Length=648, Percent_Identity=37.1913580246914, Blast_Score=436, Evalue=1e-121,
Organism=Homo sapiens, GI4826690, Length=639, Percent_Identity=37.245696400626, Blast_Score=423, Evalue=1e-118,
Organism=Homo sapiens, GI256000749, Length=649, Percent_Identity=37.2881355932203, Blast_Score=413, Evalue=1e-115,
Organism=Homo sapiens, GI255982614, Length=649, Percent_Identity=37.2881355932203, Blast_Score=412, Evalue=1e-115,
Organism=Homo sapiens, GI20544129, Length=667, Percent_Identity=35.832083958021, Blast_Score=389, Evalue=1e-108,
Organism=Homo sapiens, GI17999539, Length=635, Percent_Identity=37.007874015748, Blast_Score=384, Evalue=1e-106,
Organism=Homo sapiens, GI20336302, Length=651, Percent_Identity=32.7188940092166, Blast_Score=360, Evalue=5e-99,
Organism=Homo sapiens, GI38158022, Length=551, Percent_Identity=36.1161524500907, Blast_Score=359, Evalue=8e-99,
Organism=Homo sapiens, GI299829255, Length=606, Percent_Identity=35.6435643564356, Blast_Score=356, Evalue=8e-98,
Organism=Homo sapiens, GI261878478, Length=656, Percent_Identity=33.0792682926829, Blast_Score=353, Evalue=6e-97,
Organism=Homo sapiens, GI20336290, Length=622, Percent_Identity=31.5112540192926, Blast_Score=265, Evalue=2e-70,
Organism=Homo sapiens, GI20336294, Length=622, Percent_Identity=31.5112540192926, Blast_Score=265, Evalue=3e-70,
Organism=Homo sapiens, GI167830433, Length=647, Percent_Identity=30.9119010819165, Blast_Score=264, Evalue=4e-70,
Organism=Homo sapiens, GI261878481, Length=607, Percent_Identity=29.4892915980231, Blast_Score=263, Evalue=8e-70,
Organism=Homo sapiens, GI167830436, Length=633, Percent_Identity=31.911532385466, Blast_Score=261, Evalue=4e-69,
Organism=Homo sapiens, GI166851804, Length=602, Percent_Identity=32.0598006644518, Blast_Score=244, Evalue=6e-64,
Organism=Homo sapiens, GI20336300, Length=652, Percent_Identity=26.9938650306748, Blast_Score=238, Evalue=4e-62,
Organism=Homo sapiens, GI100913206, Length=622, Percent_Identity=29.5819935691318, Blast_Score=228, Evalue=2e-59,
Organism=Homo sapiens, GI163914394, Length=649, Percent_Identity=24.9614791987673, Blast_Score=196, Evalue=9e-50,
Organism=Homo sapiens, GI67782362, Length=194, Percent_Identity=42.7835051546392, Blast_Score=165, Evalue=3e-40,
Organism=Homo sapiens, GI29029601, Length=425, Percent_Identity=29.8823529411765, Blast_Score=155, Evalue=3e-37,
Organism=Homo sapiens, GI39777586, Length=228, Percent_Identity=35.9649122807018, Blast_Score=152, Evalue=2e-36,
Organism=Homo sapiens, GI269847874, Length=191, Percent_Identity=40.3141361256544, Blast_Score=152, Evalue=3e-36,
Organism=Escherichia coli, GI145693127, Length=1295, Percent_Identity=70.1158301158301, Blast_Score=1912, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=535, Percent_Identity=32.7102803738318, Blast_Score=245, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17535281, Length=651, Percent_Identity=36.5591397849462, Blast_Score=419, Evalue=1e-117,
Organism=Caenorhabditis elegans, GI17554326, Length=648, Percent_Identity=39.1975308641975, Blast_Score=411, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI25144243, Length=652, Percent_Identity=35.5828220858896, Blast_Score=411, Evalue=1e-114,
Organism=Caenorhabditis elegans, GI32565154, Length=644, Percent_Identity=35.5590062111801, Blast_Score=403, Evalue=1e-112,
Organism=Caenorhabditis elegans, GI17531507, Length=639, Percent_Identity=36.6197183098592, Blast_Score=389, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17556386, Length=670, Percent_Identity=34.7761194029851, Blast_Score=362, Evalue=1e-100,
Organism=Caenorhabditis elegans, GI71990212, Length=679, Percent_Identity=32.1060382916053, Blast_Score=347, Evalue=3e-95,
Organism=Caenorhabditis elegans, GI71996313, Length=504, Percent_Identity=36.1111111111111, Blast_Score=307, Evalue=2e-83,
Organism=Caenorhabditis elegans, GI17552054, Length=456, Percent_Identity=28.9473684210526, Blast_Score=167, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17507503, Length=424, Percent_Identity=26.1792452830189, Blast_Score=146, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI86562256, Length=239, Percent_Identity=35.5648535564854, Blast_Score=137, Evalue=6e-32,
Organism=Saccharomyces cerevisiae, GI6321318, Length=645, Percent_Identity=38.1395348837209, Blast_Score=429, Evalue=1e-120,
Organism=Saccharomyces cerevisiae, GI6320850, Length=657, Percent_Identity=35.0076103500761, Blast_Score=421, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6322939, Length=646, Percent_Identity=36.5325077399381, Blast_Score=360, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6322772, Length=658, Percent_Identity=34.6504559270517, Blast_Score=342, Evalue=2e-94,
Organism=Saccharomyces cerevisiae, GI6324338, Length=666, Percent_Identity=33.7837837837838, Blast_Score=338, Evalue=3e-93,
Organism=Saccharomyces cerevisiae, GI6323451, Length=591, Percent_Identity=29.1032148900169, Blast_Score=231, Evalue=8e-61,
Organism=Saccharomyces cerevisiae, GI6323776, Length=217, Percent_Identity=40.0921658986175, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI19921728, Length=647, Percent_Identity=36.1669242658423, Blast_Score=427, Evalue=1e-119,
Organism=Drosophila melanogaster, GI20129977, Length=659, Percent_Identity=37.4810318664643, Blast_Score=423, Evalue=1e-118,
Organism=Drosophila melanogaster, GI19921526, Length=712, Percent_Identity=35.814606741573, Blast_Score=412, Evalue=1e-115,
Organism=Drosophila melanogaster, GI18859729, Length=653, Percent_Identity=37.3660030627871, Blast_Score=392, Evalue=1e-109,
Organism=Drosophila melanogaster, GI19920696, Length=650, Percent_Identity=34.9230769230769, Blast_Score=354, Evalue=2e-97,
Organism=Drosophila melanogaster, GI45550174, Length=641, Percent_Identity=32.2932917316693, Blast_Score=335, Evalue=2e-91,
Organism=Drosophila melanogaster, GI24643238, Length=568, Percent_Identity=32.3943661971831, Blast_Score=318, Evalue=2e-86,
Organism=Drosophila melanogaster, GI24585491, Length=605, Percent_Identity=32.2314049586777, Blast_Score=277, Evalue=5e-74,
Organism=Drosophila melanogaster, GI17136342, Length=544, Percent_Identity=33.0882352941176, Blast_Score=241, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24585920, Length=507, Percent_Identity=34.1222879684418, Blast_Score=238, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24641942, Length=498, Percent_Identity=31.7269076305221, Blast_Score=233, Evalue=8e-61,
Organism=Drosophila melanogaster, GI24642763, Length=700, Percent_Identity=27, Blast_Score=225, Evalue=2e-58,
Organism=Drosophila melanogaster, GI17136508, Length=540, Percent_Identity=31.4814814814815, Blast_Score=215, Evalue=2e-55,
Organism=Drosophila melanogaster, GI17136242, Length=526, Percent_Identity=26.8060836501901, Blast_Score=157, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24641139, Length=197, Percent_Identity=40.6091370558376, Blast_Score=140, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 148849; Mature: 148718

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSNQNSAGALRKALSECMIRDRFRLSKRIQGASRIKNEEARNAVFDEIALDIAKSMQI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ANNREMDRPTIQYPEQLPVSQKKDDIAEAIANNQVVIVAGETGSGKTTQLPKICLELGRG
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCC
KFGNIGHTQPRRLAARSVADRIAEEMETELGSHVGYKVRFNDKVSERTQVKLMTDGILLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCEEEE
EIQSDRYLNQYDTIIIDEAHERSLNIDFIMGYLRELLPKRPDLKIIITSATIDPERFSKH
EECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHH
FNNAPIIEVSGRTFPVETRYRPIVEDGDDTDRDQLEGIFDAVDELCAEGLGDILLFMTGE
CCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
RDIRDTAEALEKRNLRDTEIVPLYARLSSQEQNRVFQSHAGRRIVLATNVAETSLTVPGI
CHHHHHHHHHHHCCCCCCCEEEHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCE
KYVIDPGTARISRYSYRTKVQRLPIEAISQASANQRKGRCGRVSEGVCIRLYSEEDFVAR
EEEECCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCCCEEC
PEFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDNRNIQDGVKLLEELGAINAEIS
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCC
DPKKRLTKVGRELARLPIDPRLARMVLEAPNQNALQEVMIIAAALSIQDPRERPSDKKQA
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHC
SDEKHKRFNHEDSDFLTFVNIWQYVKEQQKELSSNSFRKQCRKDYLNYLRIREWQDVHYQ
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQVMKELNYKVNQEAAGYQGVHTAILAGMLSHIGQKDQEKNEYQGARNARFHIFPGSGL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCC
FKKQPKWAMVAELVETSKLWGRIVAKIQPEWIEPLAPHLIKRSYSEPHWSKKSAAVMAYE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
KVTIYGIPIVVKRQINYGTIDAPVCREIFIRSALVEGDWNTNHKFFKQNRKLLQEVEELE
EEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
HKSRRRDLLIDDDQLAEFYDQRVNTDVVSGRHFDSWWKTAQKETPDLLNFEKEMLFRNDA
HHHHHCCCCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC
SHVTDLDYPNFWHQGNLKLKLSYQFEPGQDSDGVTVHVPLPILNQVTTEGFDWQIPGLRH
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHH
EMIVAYIKSLPKTLRRNFVPAPNYADAFLSRITPFDMPLLDSLEKELRRMTGVAVLREDW
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
KLEQIPDHLKVTYRVVDHHNRKLKESRDLYDLKDGLKDKVQETLSQVADDDIEQAGLKTW
CHHHCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
SFGELPALYTQKRGGFEVKAYPAIVDSKDSVGIKLFETEEEQHNAMKAGQRRLILLNVPS
CCCCCCHHHHCCCCCEEEEECCEEECCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCC
PIKYLRDNLPNKSKLGLYFNQYGRVLDLIDDCIACGVDKLIDDKGGLVWEPEAFDNMKEH
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEECCHHHHHHHHH
IRAELGDTVVEIAKLVETILTTAFQIQKKLKGRVDLSMAFALSDIKSQIENLIFKGFATE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CGWKRLTDIHRYMKAIERRMEKLPIDPTRDRAHLLKVDSVNNEYKELLNKIPKGQPIPDK
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCHHHHHHHHHCCCCCCCCHH
VKDIRWMIEELRVSYFAQQLGTPYPVSDKRVKNAIADC
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SQSNQNSAGALRKALSECMIRDRFRLSKRIQGASRIKNEEARNAVFDEIALDIAKSMQI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
ANNREMDRPTIQYPEQLPVSQKKDDIAEAIANNQVVIVAGETGSGKTTQLPKICLELGRG
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCC
KFGNIGHTQPRRLAARSVADRIAEEMETELGSHVGYKVRFNDKVSERTQVKLMTDGILLA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCEEEE
EIQSDRYLNQYDTIIIDEAHERSLNIDFIMGYLRELLPKRPDLKIIITSATIDPERFSKH
EECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHH
FNNAPIIEVSGRTFPVETRYRPIVEDGDDTDRDQLEGIFDAVDELCAEGLGDILLFMTGE
CCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECC
RDIRDTAEALEKRNLRDTEIVPLYARLSSQEQNRVFQSHAGRRIVLATNVAETSLTVPGI
CHHHHHHHHHHHCCCCCCCEEEHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCE
KYVIDPGTARISRYSYRTKVQRLPIEAISQASANQRKGRCGRVSEGVCIRLYSEEDFVAR
EEEECCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCCCEEC
PEFTDPEILRTNLASVILQMTALGLGDIQAFPFVEAPDNRNIQDGVKLLEELGAINAEIS
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCC
DPKKRLTKVGRELARLPIDPRLARMVLEAPNQNALQEVMIIAAALSIQDPRERPSDKKQA
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHC
SDEKHKRFNHEDSDFLTFVNIWQYVKEQQKELSSNSFRKQCRKDYLNYLRIREWQDVHYQ
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQVMKELNYKVNQEAAGYQGVHTAILAGMLSHIGQKDQEKNEYQGARNARFHIFPGSGL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCC
FKKQPKWAMVAELVETSKLWGRIVAKIQPEWIEPLAPHLIKRSYSEPHWSKKSAAVMAYE
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE
KVTIYGIPIVVKRQINYGTIDAPVCREIFIRSALVEGDWNTNHKFFKQNRKLLQEVEELE
EEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
HKSRRRDLLIDDDQLAEFYDQRVNTDVVSGRHFDSWWKTAQKETPDLLNFEKEMLFRNDA
HHHHHCCCCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC
SHVTDLDYPNFWHQGNLKLKLSYQFEPGQDSDGVTVHVPLPILNQVTTEGFDWQIPGLRH
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHH
EMIVAYIKSLPKTLRRNFVPAPNYADAFLSRITPFDMPLLDSLEKELRRMTGVAVLREDW
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
KLEQIPDHLKVTYRVVDHHNRKLKESRDLYDLKDGLKDKVQETLSQVADDDIEQAGLKTW
CHHHCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
SFGELPALYTQKRGGFEVKAYPAIVDSKDSVGIKLFETEEEQHNAMKAGQRRLILLNVPS
CCCCCCHHHHCCCCCEEEEECCEEECCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCC
PIKYLRDNLPNKSKLGLYFNQYGRVLDLIDDCIACGVDKLIDDKGGLVWEPEAFDNMKEH
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEECCHHHHHHHHH
IRAELGDTVVEIAKLVETILTTAFQIQKKLKGRVDLSMAFALSDIKSQIENLIFKGFATE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
CGWKRLTDIHRYMKAIERRMEKLPIDPTRDRAHLLKVDSVNNEYKELLNKIPKGQPIPDK
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCCHHHHHHHHHCCCCCCCCHH
VKDIRWMIEELRVSYFAQQLGTPYPVSDKRVKNAIADC
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]