Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695147

Identifier: 209695147

GI number: 209695147

Start: 1748538

End: 1748993

Strand: Reverse

Name: 209695147

Synonym: VSAL_I1648

Alternate gene names: NA

Gene position: 1748993-1748538 (Counterclockwise)

Preceding gene: 209695148

Following gene: 209695146

Centisome position: 52.6

GC content: 36.84

Gene sequence:

>456_bases
ATGGATTTTTCACAATTTGGCAAGAAATATGGTGCGAATTCAGCGGCGCTAGAAAGAATGACCACGAGTCAGAAACTTGA
ATGTTTAAACCTGTCAAATGATATCGATAAAATAAAAGGGTATCATTTCGAGACTGTTTGGTTGGAAGAAGAGTTTAGTG
AAGTAGAAGCTAAAATTAACCTAAGTGAGCTAGCAGGTATAAATAAGGGAGATAACTACGATACTTGGCTAGACAGTTTA
GAGACACTAAAGAAGCAAGATCATTTCACAGGATTTACTTCAATTCAAGATTTTGAAAATATACTTGTTAATCCAAATGA
TATTGACGAGTTGCCGAGGGTTATACTATCCAACGGTAAATATTACATAGACGGGAATGGACGTCACCGCCTTACAATAG
CAAAGTGTTTGGGGCTAGATACCAAAGATGTAAAGGTGAAGTTGAGAAAGCTGTAG

Upstream 100 bases:

>100_bases
GGGTTTAGTTTAGTGTTTACGGTGGTCAAATTAAGTGTTGAGGTCGCGTGCTTCACACCTTAATTGGGCGTTAGGCTACA
AATCAACATTGGAATAAAAA

Downstream 100 bases:

>100_bases
CCTAACAAGCAATTTAAGAGGAATTAACAACGCTCGGCATTTTTGCTTCTACTTCAAATTTAGCGTTTACGGCACAATAC
TTTAGATTTGGGTGGAGGCG

Product: phage protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MDFSQFGKKYGANSAALERMTTSQKLECLNLSNDIDKIKGYHFETVWLEEEFSEVEAKINLSELAGINKGDNYDTWLDSL
ETLKKQDHFTGFTSIQDFENILVNPNDIDELPRVILSNGKYYIDGNGRHRLTIAKCLGLDTKDVKVKLRKL

Sequences:

>Translated_151_residues
MDFSQFGKKYGANSAALERMTTSQKLECLNLSNDIDKIKGYHFETVWLEEEFSEVEAKINLSELAGINKGDNYDTWLDSL
ETLKKQDHFTGFTSIQDFENILVNPNDIDELPRVILSNGKYYIDGNGRHRLTIAKCLGLDTKDVKVKLRKL
>Mature_151_residues
MDFSQFGKKYGANSAALERMTTSQKLECLNLSNDIDKIKGYHFETVWLEEEFSEVEAKINLSELAGINKGDNYDTWLDSL
ETLKKQDHFTGFTSIQDFENILVNPNDIDELPRVILSNGKYYIDGNGRHRLTIAKCLGLDTKDVKVKLRKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17282; Mature: 17282

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSQFGKKYGANSAALERMTTSQKLECLNLSNDIDKIKGYHFETVWLEEEFSEVEAKIN
CCHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHCCCCEEEEEEHHHHHHHHHHCC
LSELAGINKGDNYDTWLDSLETLKKQDHFTGFTSIQDFENILVNPNDIDELPRVILSNGK
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC
YYIDGNGRHRLTIAKCLGLDTKDVKVKLRKL
EEECCCCCEEEEHHHHHCCCCHHHEEEEECC
>Mature Secondary Structure
MDFSQFGKKYGANSAALERMTTSQKLECLNLSNDIDKIKGYHFETVWLEEEFSEVEAKIN
CCHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCHHHHCCCCEEEEEEHHHHHHHHHHCC
LSELAGINKGDNYDTWLDSLETLKKQDHFTGFTSIQDFENILVNPNDIDELPRVILSNGK
HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCC
YYIDGNGRHRLTIAKCLGLDTKDVKVKLRKL
EEECCCCCEEEEHHHHHCCCCHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA