Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695146

Identifier: 209695146

GI number: 209695146

Start: 1747924

End: 1748379

Strand: Reverse

Name: 209695146

Synonym: VSAL_I1647

Alternate gene names: NA

Gene position: 1748379-1747924 (Counterclockwise)

Preceding gene: 209695147

Following gene: 209695145

Centisome position: 52.58

GC content: 34.65

Gene sequence:

>456_bases
ATGATAATGAATAAGGCTATGGATTTTTTGGTGTTACAGGTTGAATATTTAGTGCATATGCTTACTAGCCGTGCAGGTTA
CATAACTCTTTTCAAAGGGGGGCTTGCTTTAGCAACTCTATGTATAATATCAGTGCAACAAGTTTTCACACTTGCTATAC
CAATTGAGAGTGAAGCTTATAAGCTAAAATATGAGGTTGAGTTTTCGACACAAAAACAATATGAATCATTTGATTCTATG
ATTTGTAATTTACAAGACGAAACCTATGCTAAATGTAAATTGGCAATACAAAAAGAGTCTCTGATATCGAGTAGTTTTGA
TGCACTATATAGTTGGCTTGAGCTCTTTTCTGTTTTGGCTGCCCTAATGATCTTCTTTTCTATTCTTGGCTTTTTAGCCA
ACCCTCACTTTCATAAGGTCACCAGAAATGAGCCTTTCGAAAATCAAGAAACATAA

Upstream 100 bases:

>100_bases
TTTAGCGTTTACGGCACAATACTTTAGATTTGGGTGGAGGCGTTGTTCACCCCTTAATTGGGCGTTATGTTTCAGGCGGT
ATCCAGTATTTACTAAGGAC

Downstream 100 bases:

>100_bases
CAAAGCGTTTAAGACGGATTCCCAACGCTCGGCATTTTCGGTTTAATTCAGGTTTAGTGTTTACGGCACAATGGTTTAGG
TGCGGTGGTCTGCGTTGCTC

Product: membrane protein, phage gene

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MIMNKAMDFLVLQVEYLVHMLTSRAGYITLFKGGLALATLCIISVQQVFTLAIPIESEAYKLKYEVEFSTQKQYESFDSM
ICNLQDETYAKCKLAIQKESLISSSFDALYSWLELFSVLAALMIFFSILGFLANPHFHKVTRNEPFENQET

Sequences:

>Translated_151_residues
MIMNKAMDFLVLQVEYLVHMLTSRAGYITLFKGGLALATLCIISVQQVFTLAIPIESEAYKLKYEVEFSTQKQYESFDSM
ICNLQDETYAKCKLAIQKESLISSSFDALYSWLELFSVLAALMIFFSILGFLANPHFHKVTRNEPFENQET
>Mature_151_residues
MIMNKAMDFLVLQVEYLVHMLTSRAGYITLFKGGLALATLCIISVQQVFTLAIPIESEAYKLKYEVEFSTQKQYESFDSM
ICNLQDETYAKCKLAIQKESLISSSFDALYSWLELFSVLAALMIFFSILGFLANPHFHKVTRNEPFENQET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17306; Mature: 17306

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMNKAMDFLVLQVEYLVHMLTSRAGYITLFKGGLALATLCIISVQQVFTLAIPIESEAY
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCE
KLKYEVEFSTQKQYESFDSMICNLQDETYAKCKLAIQKESLISSSFDALYSWLELFSVLA
EEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALMIFFSILGFLANPHFHKVTRNEPFENQET
HHHHHHHHHHHHCCCCHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIMNKAMDFLVLQVEYLVHMLTSRAGYITLFKGGLALATLCIISVQQVFTLAIPIESEAY
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCE
KLKYEVEFSTQKQYESFDSMICNLQDETYAKCKLAIQKESLISSSFDALYSWLELFSVLA
EEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALMIFFSILGFLANPHFHKVTRNEPFENQET
HHHHHHHHHHHHCCCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA