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The map label for this gene is 209695004

Identifier: 209695004

GI number: 209695004

Start: 1604742

End: 1605449

Strand: Reverse

Name: 209695004

Synonym: VSAL_I1495

Alternate gene names: NA

Gene position: 1605449-1604742 (Counterclockwise)

Preceding gene: 209695009

Following gene: 209695000

Centisome position: 48.28

GC content: 37.43

Gene sequence:

>708_bases
ATGAATATATTGATTATTGGCGCTTCTGGAGGCATTGGACTTTCCATTGTGAAAAGCGCTATTAAACACTACCAAAATGC
CTCAATTTTAGCCACCTATCACCACCACATCGGGTTTTCTCATTTAAATGTGCACTGGATTAAATTAGATGTTACTAACG
AAAACGAGATAAAACAGCTTTCCAAAACGGTTCACGATGTAGATATTCTCATTAATGCCGTAGGATTTCTTCATTCTGAA
CAACATAAACCTGAAAAATCGATAGCGCAGTTTAGTCACGATTTATTTGATAAGAACATGAACTTAAATACATTACCTAG
CCTCATGTTAGCTAAGCATTTTGAAGCCGCCCTAAAAGCATCAACAAATAATACTTTCTATGTCGTTCTCTCGGCAAGAA
TCGGTAGCATAAAAGACAATAACATTGGTGGATGGCTAAGTTATCGCATGTCGAAAGCCGCGTTAAATATGGCAATAAAA
ACAATCAGTATCGAGTGGAAACTTAAATTGCCACACTGTTGCGTGATGTTATTTCACCCAGGAACTACGGATACCGAATT
ATCAAAACCATTTCAGAAAAATTTACCAAAAAACCAACTGCAATCGCCTGAATTCACCTCCGAATCACTGTTAACATTAA
TCCATCACTCAACACCAAGTGATTCAGGAAGGTTTCGTAGCTTTGATGGCACAGACATTGAATGGTAA

Upstream 100 bases:

>100_bases
GTAGAGATAATATCAGCATACGATTTACTTATTTTATTATGTGACTTTTACAGTCAGTCATCGCCTCTGTACCCTAGACA
TAACTTAGTGAGACTCTTTA

Downstream 100 bases:

>100_bases
CGACGATCTACCATAGAAATTTTTCGATGAGTATTTCATCAATGTATTTCCCACGAATTTTAGCATGATTCTTTGCGGTA
CCAACGATCTCAAACCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: C Factor Cell-Cell Signaling Protein; Short Chain Dehydrogenase/Reductase Family Oxidoreductase; Oxidoreductase Short Chain Dehydrogenase/Reductase Family; Short Chain Dehydrogenase; C Factor; Cell-Cell Signaling Protein C-Factor; CsgA C-Factor Signaling Protein; Short-Chain Dehydrogenase/Reductase; CsgA Rossman Fold Oxidoreductase; Dehydrogenase; Short Chain Dehydrogenase Family Protein; Cell-Cell Signaling Protein CsgA; SDR Family Dehydrogenase/Reductase; Oxidoreductase; Short-Chain Dehydrogenase/Reductase Family Protein; Short-Chain Dehydrogenase/Oxidoreductase; CsgA Protein; Glucose/Ribitol Dehydrogenase; 2-Methylthioadenine Synthetase; NAD Dependent Epimerase/Dehydratase Family; Oxidoreductase Short-Chain Dehydrogenase/Reductase Family; C-Factor; Short-Chain Dehydrogenase/Reductase Superfamily Protein; C Factor Cell Signaling Protein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNILIIGASGGIGLSIVKSAIKHYQNASILATYHHHIGFSHLNVHWIKLDVTNENEIKQLSKTVHDVDILINAVGFLHSE
QHKPEKSIAQFSHDLFDKNMNLNTLPSLMLAKHFEAALKASTNNTFYVVLSARIGSIKDNNIGGWLSYRMSKAALNMAIK
TISIEWKLKLPHCCVMLFHPGTTDTELSKPFQKNLPKNQLQSPEFTSESLLTLIHHSTPSDSGRFRSFDGTDIEW

Sequences:

>Translated_235_residues
MNILIIGASGGIGLSIVKSAIKHYQNASILATYHHHIGFSHLNVHWIKLDVTNENEIKQLSKTVHDVDILINAVGFLHSE
QHKPEKSIAQFSHDLFDKNMNLNTLPSLMLAKHFEAALKASTNNTFYVVLSARIGSIKDNNIGGWLSYRMSKAALNMAIK
TISIEWKLKLPHCCVMLFHPGTTDTELSKPFQKNLPKNQLQSPEFTSESLLTLIHHSTPSDSGRFRSFDGTDIEW
>Mature_235_residues
MNILIIGASGGIGLSIVKSAIKHYQNASILATYHHHIGFSHLNVHWIKLDVTNENEIKQLSKTVHDVDILINAVGFLHSE
QHKPEKSIAQFSHDLFDKNMNLNTLPSLMLAKHFEAALKASTNNTFYVVLSARIGSIKDNNIGGWLSYRMSKAALNMAIK
TISIEWKLKLPHCCVMLFHPGTTDTELSKPFQKNLPKNQLQSPEFTSESLLTLIHHSTPSDSGRFRSFDGTDIEW

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322779, Length=253, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24640547, Length=262, Percent_Identity=27.4809160305344, Blast_Score=70, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26355; Mature: 26355

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILIIGASGGIGLSIVKSAIKHYQNASILATYHHHIGFSHLNVHWIKLDVTNENEIKQL
CEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEHHHCCEEEEEEEEEEEEECCCHHHHHH
SKTVHDVDILINAVGFLHSEQHKPEKSIAQFSHDLFDKNMNLNTLPSLMLAKHFEAALKA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
STNNTFYVVLSARIGSIKDNNIGGWLSYRMSKAALNMAIKTISIEWKLKLPHCCVMLFHP
CCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEEEECCEEEEEEECC
GTTDTELSKPFQKNLPKNQLQSPEFTSESLLTLIHHSTPSDSGRFRSFDGTDIEW
CCCCHHHCCHHHHCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MNILIIGASGGIGLSIVKSAIKHYQNASILATYHHHIGFSHLNVHWIKLDVTNENEIKQL
CEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEHHHCCEEEEEEEEEEEEECCCHHHHHH
SKTVHDVDILINAVGFLHSEQHKPEKSIAQFSHDLFDKNMNLNTLPSLMLAKHFEAALKA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
STNNTFYVVLSARIGSIKDNNIGGWLSYRMSKAALNMAIKTISIEWKLKLPHCCVMLFHP
CCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEEEEECCEEEEEEECC
GTTDTELSKPFQKNLPKNQLQSPEFTSESLLTLIHHSTPSDSGRFRSFDGTDIEW
CCCCHHHCCHHHHCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA