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The map label for this gene is ydjC [C]

Identifier: 209695009

GI number: 209695009

Start: 1607512

End: 1608273

Strand: Reverse

Name: ydjC [C]

Synonym: VSAL_I1501

Alternate gene names: 209695009

Gene position: 1608273-1607512 (Counterclockwise)

Preceding gene: 209695011

Following gene: 209695004

Centisome position: 48.37

GC content: 39.37

Gene sequence:

>762_bases
ATGAAATTGATCATGAACGCCGATGATTTTGGCTTATCAGAAAGTGTGAATAATGGCATCGTTGAATGCTTTAAATCAGG
TATCGTTACCTCAACCACCATAATGATGAATCAAAAAGGCGTTGAGCACGCAGCACAACTGTATAAACAAGGTTTAGTCC
CTGAGATTGGTTTGCATTTTACCGTCACCGCAGGACAGCCACTGTCAGATCCTTTGATGGTATCAAGCTTAGTTGACGAA
CATGGTTATTTTTTGGATAGAAAAACCTTAATGAATAAAAATGTATGTGAAGAAGAAGTCTATATTGAGCTTCACGCACA
GTACAATGCCGCTATTGAGTTGGGCTTGAATATTAACCACATTGATAGCCATCATTTCGCTGGTGTCTATCCACCACTAA
AAAAAGCATTTATCCGTTTTGCTAATGAGATTAACCTCCCAGTTCGCCGAATAGATAACATCAGTCACGGGCAAGATGGG
CTAACAGTGCGAACTCCTGATGCGTTTGATGCTCAGTTTTTTGATTCAGGCGTCTCTCTTGAGCAACTAAAAACACTAAT
TTTAAGCTATAAAGACACGCTTTCTGATGGCATTTTAGAACTGATGTGTCACCCAAGTACAGAAGACAATTCTGATCTTA
CTGAGTTAACCAGTTACATGGCTATGCGTGTAATAGAAAGAGATTTACTGACGTCGCCAGAATTATCACACTGGCTTAAA
AAAGAAGGGATTGAATGCGTTGGTTTTAATGCGTTGTCTTAA

Upstream 100 bases:

>100_bases
AGTAATCCATCACCGCATTATACTCACTTGTCAGTGTCGATTAAATGGCTTATTAATAGACTTAATAGTCCAAAAAATAA
TGATATTAGGATGAAAAACC

Downstream 100 bases:

>100_bases
CCTTATTATGGGTAAAACCCCAATGACACCCTACTTATAAGCAGTCGTGTCATTGGGCTGTTTAATGTAAAGCCAAACTA
AAGAATGACTACACCTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKLIMNADDFGLSESVNNGIVECFKSGIVTSTTIMMNQKGVEHAAQLYKQGLVPEIGLHFTVTAGQPLSDPLMVSSLVDE
HGYFLDRKTLMNKNVCEEEVYIELHAQYNAAIELGLNINHIDSHHFAGVYPPLKKAFIRFANEINLPVRRIDNISHGQDG
LTVRTPDAFDAQFFDSGVSLEQLKTLILSYKDTLSDGILELMCHPSTEDNSDLTELTSYMAMRVIERDLLTSPELSHWLK
KEGIECVGFNALS

Sequences:

>Translated_253_residues
MKLIMNADDFGLSESVNNGIVECFKSGIVTSTTIMMNQKGVEHAAQLYKQGLVPEIGLHFTVTAGQPLSDPLMVSSLVDE
HGYFLDRKTLMNKNVCEEEVYIELHAQYNAAIELGLNINHIDSHHFAGVYPPLKKAFIRFANEINLPVRRIDNISHGQDG
LTVRTPDAFDAQFFDSGVSLEQLKTLILSYKDTLSDGILELMCHPSTEDNSDLTELTSYMAMRVIERDLLTSPELSHWLK
KEGIECVGFNALS
>Mature_253_residues
MKLIMNADDFGLSESVNNGIVECFKSGIVTSTTIMMNQKGVEHAAQLYKQGLVPEIGLHFTVTAGQPLSDPLMVSSLVDE
HGYFLDRKTLMNKNVCEEEVYIELHAQYNAAIELGLNINHIDSHHFAGVYPPLKKAFIRFANEINLPVRRIDNISHGQDG
LTVRTPDAFDAQFFDSGVSLEQLKTLILSYKDTLSDGILELMCHPSTEDNSDLTELTSYMAMRVIERDLLTSPELSHWLK
KEGIECVGFNALS

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Homo sapiens, GI63054868, Length=164, Percent_Identity=32.9268292682927, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1788028, Length=251, Percent_Identity=33.8645418326693, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 28236; Mature: 28236

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIMNADDFGLSESVNNGIVECFKSGIVTSTTIMMNQKGVEHAAQLYKQGLVPEIGLHF
CEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEE
TVTAGQPLSDPLMVSSLVDEHGYFLDRKTLMNKNVCEEEVYIELHAQYNAAIELGLNINH
EEECCCCCCCHHHHHHHHHHCCCEECHHHHHCCCCCCCEEEEEEEECCCEEEEECCCEEE
IDSHHFAGVYPPLKKAFIRFANEINLPVRRIDNISHGQDGLTVRTPDAFDAQFFDSGVSL
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEECCCCCCHHHHCCCCCH
EQLKTLILSYKDTLSDGILELMCHPSTEDNSDLTELTSYMAMRVIERDLLTSPELSHWLK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KEGIECVGFNALS
HCCCCEECCCCCC
>Mature Secondary Structure
MKLIMNADDFGLSESVNNGIVECFKSGIVTSTTIMMNQKGVEHAAQLYKQGLVPEIGLHF
CEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEE
TVTAGQPLSDPLMVSSLVDEHGYFLDRKTLMNKNVCEEEVYIELHAQYNAAIELGLNINH
EEECCCCCCCHHHHHHHHHHCCCEECHHHHHCCCCCCCEEEEEEEECCCEEEEECCCEEE
IDSHHFAGVYPPLKKAFIRFANEINLPVRRIDNISHGQDGLTVRTPDAFDAQFFDSGVSL
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEECCCCCCHHHHCCCCCH
EQLKTLILSYKDTLSDGILELMCHPSTEDNSDLTELTSYMAMRVIERDLLTSPELSHWLK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KEGIECVGFNALS
HCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA