Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is yecA [C]

Identifier: 209694919

GI number: 209694919

Start: 1509379

End: 1509711

Strand: Reverse

Name: yecA [C]

Synonym: VSAL_I1393

Alternate gene names: 209694919

Gene position: 1509711-1509379 (Counterclockwise)

Preceding gene: 209694923

Following gene: 209694916

Centisome position: 45.4

GC content: 37.84

Gene sequence:

>333_bases
ATGTCTAAAATGTTCTTCAAAGGTCGTATCGAGACTCGTCAAAACCACGTTAAATCTGGTTTTAACACTAAGCGTGACGT
TAAGTTAGGTACTGAAGAAGCACCACTGACTTTAGTTGTTCAAACAGAAGAACGTAAAGTTGAAATTGAAGCGCAGATTA
CTGAGCACGATTTATTCGCAAACATCGAAGTGAATGCTGAAAAAGAAGAGAATATTCTTGAGCTTGAAGGCGTACTAAAC
AAGCCAAAAACAACTCGCTTTGAAAAAACACCTAACCGCAATGAAGCATGTCCTTGTGGTAGCGGTCAAAAATACAAAAA
ATGTTGTGCTTAA

Upstream 100 bases:

>100_bases
TTCCAAACTCATTTTTATATTTCGTTATCACTTTATCCATCTTCTTGTTGATGGTATAAAGTGGCTAAAATACTGTGTTC
AAAAATTATAAGGCTCCAAG

Downstream 100 bases:

>100_bases
TCACTATTTTAAATAGCTAAGCTAAACACAAAAAAGAGCCTCTGTTATCACTAACATGAGGCTCTTTTTTTATGTGCATT
TTCTTATTACCTGTAACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: SEC-C Motif Domain-Containing Protein; SEC-C Motif Domain Protein; Preprotein Translocase Subunit-Like Protein; ATPase

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSKMFFKGRIETRQNHVKSGFNTKRDVKLGTEEAPLTLVVQTEERKVEIEAQITEHDLFANIEVNAEKEENILELEGVLN
KPKTTRFEKTPNRNEACPCGSGQKYKKCCA

Sequences:

>Translated_110_residues
MSKMFFKGRIETRQNHVKSGFNTKRDVKLGTEEAPLTLVVQTEERKVEIEAQITEHDLFANIEVNAEKEENILELEGVLN
KPKTTRFEKTPNRNEACPCGSGQKYKKCCA
>Mature_109_residues
SKMFFKGRIETRQNHVKSGFNTKRDVKLGTEEAPLTLVVQTEERKVEIEAQITEHDLFANIEVNAEKEENILELEGVLNK
PKTTRFEKTPNRNEACPCGSGQKYKKCCA

Specific function: Unknown

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12571; Mature: 12440

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKMFFKGRIETRQNHVKSGFNTKRDVKLGTEEAPLTLVVQTEERKVEIEAQITEHDLFA
CCCCEECCCCCCHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEEECCEEEE
NIEVNAEKEENILELEGVLNKPKTTRFEKTPNRNEACPCGSGQKYKKCCA
EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
SKMFFKGRIETRQNHVKSGFNTKRDVKLGTEEAPLTLVVQTEERKVEIEAQITEHDLFA
CCCEECCCCCCHHHHHHCCCCCCCCEEECCCCCCEEEEEECCCCEEEEEEEEECCEEEE
NIEVNAEKEENILELEGVLNKPKTTRFEKTPNRNEACPCGSGQKYKKCCA
EEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA