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The map label for this gene is 209694916

Identifier: 209694916

GI number: 209694916

Start: 1506586

End: 1507389

Strand: Reverse

Name: 209694916

Synonym: VSAL_I1390

Alternate gene names: NA

Gene position: 1507389-1506586 (Counterclockwise)

Preceding gene: 209694919

Following gene: 209694913

Centisome position: 45.33

GC content: 37.56

Gene sequence:

>804_bases
ATGGAAAATAGCTGGATTGAACAAAGTGACACTATCCGCCTTGGCTGCTTTGTCGCTGCTTTCATCCTTTTTGCTTTGGT
TGAGTATAAATGGCCACGTAAAAAGTTGACTCAAAAAAAATCATTACGCTGGGTAAATAACCTTGGTTTAATCGTATTTA
ATAGTATTGTTCTACGCCTAGCCTTACCGCTATTAGCCATTGATGCAGCTTATATCGCACAACAAGAAAATTTTGGAGTC
TTTAATTACCTTGGAACCCCTTACTTTTTGACATTTCTCCTTTCTATTTTATTGTTAGATTGGATTATCTATTGGCAGCA
CCGTGCTTTTCATCGTGTTCCTTCATTATGGCGCTTACATCGAATGCACCATTCTGACCAAGACATTGATTTAACGACAG
GAACTCGATTTCATCCGGTAGAAATTATTTTATCCATGTTGATAAAAATTGCGGCCATCGGGATCTTAGGGATTCCAGTT
GAAGCCGTCATTGTCTTTGAAATAATTTTGAATGTAAGTGCAATGTTTAATCACAGTAATCTCCATATTCCACGATGGTT
AGATCGTTACATCAGAACCTTACTTATTACCCCTGATGTGCACAGAGTTCACCATTCAATCCATGTCACCGAGATGAATA
ACAACTATGGGTTCTTTTTATCTATTTGGGATCGTATTGGAAAAACGTATTTAGTGAGACCAAGAGATGGGCACGAAGAC
ATGAAAATAGGGACCGCTTTATTTAGAAGCGAAAAAGAGCAACGGTTAGACAAAATGTTGACTCAACCATTTAGGAAAAA
ATAA

Upstream 100 bases:

>100_bases
GAGTGAATACGCATTTACAATAACCAAGCTATTTATATGGAAAAAAAAGCGCATTTTACTTACAGTGTCGGTAATAACAA
GTTCTATAAGAGAATTCCTC

Downstream 100 bases:

>100_bases
CGTTTATTGATGAGGTGCCTTCAATGGCACCTTACTTAATACTCAAATGAGTTAACTTCATAATCAGTTAAATAACGCCA
TTCACCTTCATTTACATCCA

Product: membrane protein

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase-Related Protein; Sterol Desaturase-Like Protein; Transmembrane Protein; C-5 Sterol Desaturase; Sterol Desaturase -Like Protein; YhhN Family Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase Family Protein; Sterol Desaturate; Yhhn Family Protein; Fatty Acid Hydroxylase Superfamily Protein; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MENSWIEQSDTIRLGCFVAAFILFALVEYKWPRKKLTQKKSLRWVNNLGLIVFNSIVLRLALPLLAIDAAYIAQQENFGV
FNYLGTPYFLTFLLSILLLDWIIYWQHRAFHRVPSLWRLHRMHHSDQDIDLTTGTRFHPVEIILSMLIKIAAIGILGIPV
EAVIVFEIILNVSAMFNHSNLHIPRWLDRYIRTLLITPDVHRVHHSIHVTEMNNNYGFFLSIWDRIGKTYLVRPRDGHED
MKIGTALFRSEKEQRLDKMLTQPFRKK

Sequences:

>Translated_267_residues
MENSWIEQSDTIRLGCFVAAFILFALVEYKWPRKKLTQKKSLRWVNNLGLIVFNSIVLRLALPLLAIDAAYIAQQENFGV
FNYLGTPYFLTFLLSILLLDWIIYWQHRAFHRVPSLWRLHRMHHSDQDIDLTTGTRFHPVEIILSMLIKIAAIGILGIPV
EAVIVFEIILNVSAMFNHSNLHIPRWLDRYIRTLLITPDVHRVHHSIHVTEMNNNYGFFLSIWDRIGKTYLVRPRDGHED
MKIGTALFRSEKEQRLDKMLTQPFRKK
>Mature_267_residues
MENSWIEQSDTIRLGCFVAAFILFALVEYKWPRKKLTQKKSLRWVNNLGLIVFNSIVLRLALPLLAIDAAYIAQQENFGV
FNYLGTPYFLTFLLSILLLDWIIYWQHRAFHRVPSLWRLHRMHHSDQDIDLTTGTRFHPVEIILSMLIKIAAIGILGIPV
EAVIVFEIILNVSAMFNHSNLHIPRWLDRYIRTLLITPDVHRVHHSIHVTEMNNNYGFFLSIWDRIGKTYLVRPRDGHED
MKIGTALFRSEKEQRLDKMLTQPFRKK

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31429; Mature: 31429

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSWIEQSDTIRLGCFVAAFILFALVEYKWPRKKLTQKKSLRWVNNLGLIVFNSIVLRL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ALPLLAIDAAYIAQQENFGVFNYLGTPYFLTFLLSILLLDWIIYWQHRAFHRVPSLWRLH
HHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMHHSDQDIDLTTGTRFHPVEIILSMLIKIAAIGILGIPVEAVIVFEIILNVSAMFNHSN
HHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
LHIPRWLDRYIRTLLITPDVHRVHHSIHVTEMNNNYGFFLSIWDRIGKTYLVRPRDGHED
CCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCEEEEEEHHHHCCEEEECCCCCCCH
MKIGTALFRSEKEQRLDKMLTQPFRKK
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENSWIEQSDTIRLGCFVAAFILFALVEYKWPRKKLTQKKSLRWVNNLGLIVFNSIVLRL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ALPLLAIDAAYIAQQENFGVFNYLGTPYFLTFLLSILLLDWIIYWQHRAFHRVPSLWRLH
HHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMHHSDQDIDLTTGTRFHPVEIILSMLIKIAAIGILGIPVEAVIVFEIILNVSAMFNHSN
HHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
LHIPRWLDRYIRTLLITPDVHRVHHSIHVTEMNNNYGFFLSIWDRIGKTYLVRPRDGHED
CCCHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCCEEEEEEHHHHCCEEEECCCCCCCH
MKIGTALFRSEKEQRLDKMLTQPFRKK
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA