| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yniA [C]
Identifier: 209694911
GI number: 209694911
Start: 1501813
End: 1502679
Strand: Reverse
Name: yniA [C]
Synonym: VSAL_I1385
Alternate gene names: 209694911
Gene position: 1502679-1501813 (Counterclockwise)
Preceding gene: 209694913
Following gene: 209694910
Centisome position: 45.19
GC content: 38.41
Gene sequence:
>867_bases ATGTGGCAAGCAATCGCTCAACAAATCTCTGACGTGACAAAACGCCCTTTTACCATCTCAGATCGTGAAACCATTAATGG TGGCGAGATAAATGACTGCTATATGATCAGTAATGGATCTGAACGTTATTTTGTAAAAGTAAATGATCGGGCTGAGCTTC CTATCTTTGAAACTGAACTGGAAAGTCTGACTCAACTCGATAAATCAGATCATATTTTTGTTCCAAAACCTATTCATATC GGAGTAACTAAAACTCACTCTTTTCTTGTTCTAAATTATCTTCCAACCAAAGTCATGGATAAAAAGGCCTCTTATGACTT AGGCATTAGTCTTGCCCACCACCATTTGTGGGGCGACCAATTAGAATACGGTTTTGACGGCGATAACTATCTTGGTAGTG TATTACAAGTAAATACATGGCATCGAAGATGGGACTGTTTTTTTGCGGAACAACGCATTGGTTGGCAACTTCAACTATTG CATGAAAAAGGGATGTTTTTAGGAGATATCGACACCCTTGTTAATAATTCAAAGAAAATCCTACACAATCATAATCCTAA ACCCTCATTACTGCATGGCGATTTCTGGCATGGTAATGTGTCACTCAGTGTTAAAGGTCCGATAGTTTATGATCCAGCTT GCTACTGGGGAGATCCTGAATGCGATCTTGCCATGGCAACACTATTTGGTGGTTTTCAAGACAGTTTTTTTGAAGGTTAT TTGTCTATCCGTAACATTGAGGAGGGGTTTGAAACTCGTCAAAACCTTTATAATCTTTATCACGTACTCAACCACTGTAA TATGTTCGGTGGTGAATATTTAAACCATGCTCAACAATTGATCGATAAATTAAACCTAACCCATTGA
Upstream 100 bases:
>100_bases TTTAGATTAAATATTTAACGCTTTTAGCTGTACTTCACAGATATTTATCAAAAATACACTATGATTAATGAAGATATTTT TAGACACAAGAGAGGCAATT
Downstream 100 bases:
>100_bases GCAGCTAAATATTAAAAACAGTTTGAGGTGATCTTTATCACCTCATTTTTTATATCTTATTTATCAAGCCTTTAAAAAAT AAGCCCTAAGTCAACCTTTC
Product: hypothetical protein
Products: phosphatidylethanolamine; CO2
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MWQAIAQQISDVTKRPFTISDRETINGGEINDCYMISNGSERYFVKVNDRAELPIFETELESLTQLDKSDHIFVPKPIHI GVTKTHSFLVLNYLPTKVMDKKASYDLGISLAHHHLWGDQLEYGFDGDNYLGSVLQVNTWHRRWDCFFAEQRIGWQLQLL HEKGMFLGDIDTLVNNSKKILHNHNPKPSLLHGDFWHGNVSLSVKGPIVYDPACYWGDPECDLAMATLFGGFQDSFFEGY LSIRNIEEGFETRQNLYNLYHVLNHCNMFGGEYLNHAQQLIDKLNLTH
Sequences:
>Translated_288_residues MWQAIAQQISDVTKRPFTISDRETINGGEINDCYMISNGSERYFVKVNDRAELPIFETELESLTQLDKSDHIFVPKPIHI GVTKTHSFLVLNYLPTKVMDKKASYDLGISLAHHHLWGDQLEYGFDGDNYLGSVLQVNTWHRRWDCFFAEQRIGWQLQLL HEKGMFLGDIDTLVNNSKKILHNHNPKPSLLHGDFWHGNVSLSVKGPIVYDPACYWGDPECDLAMATLFGGFQDSFFEGY LSIRNIEEGFETRQNLYNLYHVLNHCNMFGGEYLNHAQQLIDKLNLTH >Mature_288_residues MWQAIAQQISDVTKRPFTISDRETINGGEINDCYMISNGSERYFVKVNDRAELPIFETELESLTQLDKSDHIFVPKPIHI GVTKTHSFLVLNYLPTKVMDKKASYDLGISLAHHHLWGDQLEYGFDGDNYLGSVLQVNTWHRRWDCFFAEQRIGWQLQLL HEKGMFLGDIDTLVNNSKKILHNHNPKPSLLHGDFWHGNVSLSVKGPIVYDPACYWGDPECDLAMATLFGGFQDSFFEGY LSIRNIEEGFETRQNLYNLYHVLNHCNMFGGEYLNHAQQLIDKLNLTH
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family [H]
Homologues:
Organism=Homo sapiens, GI20149680, Length=291, Percent_Identity=32.9896907216495, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI11545906, Length=321, Percent_Identity=30.2180685358255, Blast_Score=128, Evalue=6e-30, Organism=Escherichia coli, GI1788019, Length=284, Percent_Identity=43.3098591549296, Blast_Score=256, Evalue=9e-70, Organism=Caenorhabditis elegans, GI212659227, Length=307, Percent_Identity=27.3615635179153, Blast_Score=98, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016477 - InterPro: IPR011009 [H]
Pfam domain/function: PF03881 Fructosamin_kin [H]
EC number: 4.1.1.65
Molecular weight: Translated: 33224; Mature: 33224
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQAIAQQISDVTKRPFTISDRETINGGEINDCYMISNGSERYFVKVNDRAELPIFETEL CHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHH ESLTQLDKSDHIFVPKPIHIGVTKTHSFLVLNYLPTKVMDKKASYDLGISLAHHHLWGDQ HHHHHCCCCCCEECCCCEEEEEECCCEEEEEECCCHHHHCCCCCCCCCEEEHHHHCCCCC LEYGFDGDNYLGSVLQVNTWHRRWDCFFAEQRIGWQLQLLHEKGMFLGDIDTLVNNSKKI EECCCCCCHHHCCEEEEECCHHHHHEEEECCCCCEEEEEEECCCCEEECHHHHHCCCHHH LHNHNPKPSLLHGDFWHGNVSLSVKGPIVYDPACYWGDPECDLAMATLFGGFQDSFFEGY HHCCCCCCCEEECCEEECEEEEEECCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHH LSIRNIEEGFETRQNLYNLYHVLNHCNMFGGEYLNHAQQLIDKLNLTH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MWQAIAQQISDVTKRPFTISDRETINGGEINDCYMISNGSERYFVKVNDRAELPIFETEL CHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHH ESLTQLDKSDHIFVPKPIHIGVTKTHSFLVLNYLPTKVMDKKASYDLGISLAHHHLWGDQ HHHHHCCCCCCEECCCCEEEEEECCCEEEEEECCCHHHHCCCCCCCCCEEEHHHHCCCCC LEYGFDGDNYLGSVLQVNTWHRRWDCFFAEQRIGWQLQLLHEKGMFLGDIDTLVNNSKKI EECCCCCCHHHCCEEEEECCHHHHHEEEECCCCCEEEEEEECCCCEEECHHHHHCCCHHH LHNHNPKPSLLHGDFWHGNVSLSVKGPIVYDPACYWGDPECDLAMATLFGGFQDSFFEGY HHCCCCCCCEEECCEEECEEEEEECCCEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHH LSIRNIEEGFETRQNLYNLYHVLNHCNMFGGEYLNHAQQLIDKLNLTH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphatidyl-L-serine
Specific reaction: phosphatidyl-L-serine = phosphatidylethanolamine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]