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The map label for this gene is spr [H]

Identifier: 209694913

GI number: 209694913

Start: 1503335

End: 1503823

Strand: Reverse

Name: spr [H]

Synonym: VSAL_I1387

Alternate gene names: 209694913

Gene position: 1503823-1503335 (Counterclockwise)

Preceding gene: 209694916

Following gene: 209694911

Centisome position: 45.23

GC content: 38.24

Gene sequence:

>489_bases
ATGACTCGCAATATCTCTTTAATCTTTGGCTTTATCCTATTAAGTAGCATCGCAGGCTGTAGCTCTACGCCACCCTCCCA
ACAATTATCGAAACAAGATATTGAAGTTAAATACCCACAGTTGAAGCAATCCGATGGCTATCAAGATTATTTTCGAGAAT
GGCAAGGCGTCCCTTATAAATACGGTGGAATAAGTAAAGATGGTGTGGATTGCTCAGCTTTTACTCAAGACGCACTTCAA
ACATTACATCAATTATCTTTACCTAGAACGACTGAGTATCAAATATCAACGGGGCAGAAAATTGCGCTCGTAAATGCAAA
GAAAGGCGATCTTATTTTCTTTAAAACAGGAATAAAAGTAAGACATGTAGGTGTGTATATTGGAAACCGTGAATTCATGC
ATGCTTCAACATCAAAAGGCGTCATTATCTCAAGTCTTGATAATCCATATTGGAAAAAAGCGTATTGGCAAGCAAGGCGA
GTGTTGTAA

Upstream 100 bases:

>100_bases
GTTATACCAATTAACTATTACAACATCTTATTCACAATCACTTGATGTCTTCAACGTTATTTCTATGCAATAATAGAGAA
AACGCATTAGGATTTTTATC

Downstream 100 bases:

>100_bases
TTTTCATAAAAAAGCTAAGAAAAAATAGATAAGTATTTACCTTAATTCTCTTAGCTTCATTAATTTATTGTCTAATTATT
TAAAAGCACTATCAAAAAGA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTRNISLIFGFILLSSIAGCSSTPPSQQLSKQDIEVKYPQLKQSDGYQDYFREWQGVPYKYGGISKDGVDCSAFTQDALQ
TLHQLSLPRTTEYQISTGQKIALVNAKKGDLIFFKTGIKVRHVGVYIGNREFMHASTSKGVIISSLDNPYWKKAYWQARR
VL

Sequences:

>Translated_162_residues
MTRNISLIFGFILLSSIAGCSSTPPSQQLSKQDIEVKYPQLKQSDGYQDYFREWQGVPYKYGGISKDGVDCSAFTQDALQ
TLHQLSLPRTTEYQISTGQKIALVNAKKGDLIFFKTGIKVRHVGVYIGNREFMHASTSKGVIISSLDNPYWKKAYWQARR
VL
>Mature_161_residues
TRNISLIFGFILLSSIAGCSSTPPSQQLSKQDIEVKYPQLKQSDGYQDYFREWQGVPYKYGGISKDGVDCSAFTQDALQT
LHQLSLPRTTEYQISTGQKIALVNAKKGDLIFFKTGIKVRHVGVYIGNREFMHASTSKGVIISSLDNPYWKKAYWQARRV
L

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=141, Percent_Identity=44.6808510638298, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1788001, Length=148, Percent_Identity=44.5945945945946, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1787944, Length=113, Percent_Identity=38.0530973451327, Blast_Score=74, Evalue=4e-15,
Organism=Escherichia coli, GI1786421, Length=113, Percent_Identity=33.6283185840708, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 18305; Mature: 18174

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNISLIFGFILLSSIAGCSSTPPSQQLSKQDIEVKYPQLKQSDGYQDYFREWQGVPYK
CCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCEE
YGGISKDGVDCSAFTQDALQTLHQLSLPRTTEYQISTGQKIALVNAKKGDLIFFKTGIKV
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCEEEEECCCEE
RHVGVYIGNREFMHASTSKGVIISSLDNPYWKKAYWQARRVL
EEEEEEECCEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TRNISLIFGFILLSSIAGCSSTPPSQQLSKQDIEVKYPQLKQSDGYQDYFREWQGVPYK
CCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCEE
YGGISKDGVDCSAFTQDALQTLHQLSLPRTTEYQISTGQKIALVNAKKGDLIFFKTGIKV
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCEEEEECCCEE
RHVGVYIGNREFMHASTSKGVIISSLDNPYWKKAYWQARRVL
EEEEEEECCEEEEECCCCCCEEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]