| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is 209694910
Identifier: 209694910
GI number: 209694910
Start: 1501380
End: 1501583
Strand: Reverse
Name: 209694910
Synonym: VSAL_I1384
Alternate gene names: NA
Gene position: 1501583-1501380 (Counterclockwise)
Preceding gene: 209694911
Following gene: 209694908
Centisome position: 45.16
GC content: 36.76
Gene sequence:
>204_bases TTGAATAATTACATTACGAAAAATATAGAATGCCCAAATTGTCAGCACTCTATTGATATGGTAATCGGTCAAAATCAACG TAGTCAGCAGGTGTATGATGATTGCCCATCTTGCCATCGTGCTATTGAAATGAAAATGACCGTTAACCCGCATAACAGTA CGATAAACTTATCGATAGACAGTAATGAAGACGGGCTGTTTTAA
Upstream 100 bases:
>100_bases TTTTCTATTATTGACTAGTCACATTGTTGCAGACTTTTCTAACAATATGATGCGCCAAGAACCTCGGCGGTAATTGCAGT ACAATTAGAAGGAGTTTATT
Downstream 100 bases:
>100_bases TTCATTATGATCAAATTAATTATTTTGGTTCGCTAATACTCGCTCAATCGTATCGACAATAGCTTGGGTTTGCGGATCAA TTTCTAAATTAATTTTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MNNYITKNIECPNCQHSIDMVIGQNQRSQQVYDDCPSCHRAIEMKMTVNPHNSTINLSIDSNEDGLF
Sequences:
>Translated_67_residues MNNYITKNIECPNCQHSIDMVIGQNQRSQQVYDDCPSCHRAIEMKMTVNPHNSTINLSIDSNEDGLF >Mature_67_residues MNNYITKNIECPNCQHSIDMVIGQNQRSQQVYDDCPSCHRAIEMKMTVNPHNSTINLSIDSNEDGLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7658; Mature: 7658
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 11.9 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 11.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYITKNIECPNCQHSIDMVIGQNQRSQQVYDDCPSCHRAIEMKMTVNPHNSTINLSID CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCEEEEEEEECCCCCEEEEEEE SNEDGLF CCCCCCC >Mature Secondary Structure MNNYITKNIECPNCQHSIDMVIGQNQRSQQVYDDCPSCHRAIEMKMTVNPHNSTINLSID CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCEEEEEEEECCCCCEEEEEEE SNEDGLF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA