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The map label for this gene is nudL [H]

Identifier: 209694874

GI number: 209694874

Start: 1460522

End: 1461130

Strand: Reverse

Name: nudL [H]

Synonym: VSAL_I1345

Alternate gene names: 209694874

Gene position: 1461130-1460522 (Counterclockwise)

Preceding gene: 209694875

Following gene: 209694873

Centisome position: 43.94

GC content: 37.27

Gene sequence:

>609_bases
ATGTCACTTAAACTAAGGATCCGGCTTATGGATACACATTTATTGTCTCATTTATTACTCAATAAGCCGAATTCATACAG
TGAAGATTTATTGCTGCACCCTCGCTTTAAAAACACAAATTTTAAGCAAGCCGCCGTCCTCGTTCCTCTCGTAAAAAGGC
CCTCTGGATTGCACTTAATTTTGACTCAAAGAGCCGCTCATTTACACCATCATCCAAGTCAAATTAGCTTCCCTGGAGGC
AAGGCCGAACCGTCTGATTTATCCTTAATTCATACTGCAATTCGTGAGACAAATGAAGAGATCGGCATTCAACTTGAACA
AATACACCCATTAGTAAAACTTAACACAATACCAACAATATCCGGTTATAAAGTAACCCCTATCGTTGCACTTATTGATG
AAAATTATACCACCGCAATCGATTACGGTGAGGTTAGTAGCACATTTGAAGCACCACTCTCCCACCTACTTAACCCAATG
AATACGACAAAGCACAAAGTTTTTAACAAAAAACACACGTATGAGTTAATTTTTATTCCTTTTAATAAAAAACTCATTTG
GGGAATTACCGCAGAAATCATTCATTCAATGAATCACATTACAAATTAG

Upstream 100 bases:

>100_bases
TATACGCTTCCGCTGGCGGTGGCATTGTTGCAGATAGCGAAGTTGAACTAGAATATGAAGAGACATTACATAAGTTAAGT
AAAATTCTACCGATATTATA

Downstream 100 bases:

>100_bases
AAAAACCAGCCTTCATTAATAAGTTTTTCTAATCCGAACTCAATACCTACTGTGATCATTATCAATAATCTTCAGTTCTC
CATTCATATTTTTTCATTTG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSLKLRIRLMDTHLLSHLLLNKPNSYSEDLLLHPRFKNTNFKQAAVLVPLVKRPSGLHLILTQRAAHLHHHPSQISFPGG
KAEPSDLSLIHTAIRETNEEIGIQLEQIHPLVKLNTIPTISGYKVTPIVALIDENYTTAIDYGEVSSTFEAPLSHLLNPM
NTTKHKVFNKKHTYELIFIPFNKKLIWGITAEIIHSMNHITN

Sequences:

>Translated_202_residues
MSLKLRIRLMDTHLLSHLLLNKPNSYSEDLLLHPRFKNTNFKQAAVLVPLVKRPSGLHLILTQRAAHLHHHPSQISFPGG
KAEPSDLSLIHTAIRETNEEIGIQLEQIHPLVKLNTIPTISGYKVTPIVALIDENYTTAIDYGEVSSTFEAPLSHLLNPM
NTTKHKVFNKKHTYELIFIPFNKKLIWGITAEIIHSMNHITN
>Mature_201_residues
SLKLRIRLMDTHLLSHLLLNKPNSYSEDLLLHPRFKNTNFKQAAVLVPLVKRPSGLHLILTQRAAHLHHHPSQISFPGGK
AEPSDLSLIHTAIRETNEEIGIQLEQIHPLVKLNTIPTISGYKVTPIVALIDENYTTAIDYGEVSSTFEAPLSHLLNPMN
TTKHKVFNKKHTYELIFIPFNKKLIWGITAEIIHSMNHITN

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=140, Percent_Identity=32.1428571428571, Blast_Score=91, Evalue=7e-19,
Organism=Escherichia coli, GI1788115, Length=169, Percent_Identity=33.7278106508876, Blast_Score=92, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17536993, Length=133, Percent_Identity=32.3308270676692, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI18859683, Length=163, Percent_Identity=28.8343558282209, Blast_Score=76, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22918; Mature: 22787

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKLRIRLMDTHLLSHLLLNKPNSYSEDLLLHPRFKNTNFKQAAVLVPLVKRPSGLHLI
CCEEEEEEEHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHEEEEEHHCCCCCCEEE
LTQRAAHLHHHPSQISFPGGKAEPSDLSLIHTAIRETNEEIGIQLEQIHPLVKLNTIPTI
EEHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHCEEHHHHCCEEEECCCCCC
SGYKVTPIVALIDENYTTAIDYGEVSSTFEAPLSHLLNPMNTTKHKVFNKKHTYELIFIP
CCCEECEEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEE
FNKKLIWGITAEIIHSMNHITN
CCCEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLKLRIRLMDTHLLSHLLLNKPNSYSEDLLLHPRFKNTNFKQAAVLVPLVKRPSGLHLI
CEEEEEEEHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHEEEEEHHCCCCCCEEE
LTQRAAHLHHHPSQISFPGGKAEPSDLSLIHTAIRETNEEIGIQLEQIHPLVKLNTIPTI
EEHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHCEEHHHHCCEEEECCCCCC
SGYKVTPIVALIDENYTTAIDYGEVSSTFEAPLSHLLNPMNTTKHKVFNKKHTYELIFIP
CCCEECEEEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEE
FNKKLIWGITAEIIHSMNHITN
CCCEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA