| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is asnO [H]
Identifier: 209694839
GI number: 209694839
Start: 1416608
End: 1417630
Strand: Reverse
Name: asnO [H]
Synonym: VSAL_I1305
Alternate gene names: 209694839
Gene position: 1417630-1416608 (Counterclockwise)
Preceding gene: 209694842
Following gene: 209694838
Centisome position: 42.63
GC content: 34.6
Gene sequence:
>1023_bases GTGTTCAATTTAAAAAAAGAAAGCAGCCAAGAGCTGCTAAAAATAATAGAAATTCATATTCCTTACGATTCAGCAAGGAA ATTAAGCAGCGCATTTTCTCACTTGAGATTAGGAGATGACAAATCATGGCTAAGAACTAGTCATTGGTTCGGAACTACAA TAAAGCATTGTTTAATAAAAGAACTTAATTATAAAATTTCTAATTTCAAAGAAAATAAAGATCAACAGGCATTAATTATT AGAGGCTTACCTATTGATCAAAACCTTTGTAAAACACCATATAATGGCTATGTTTCACCAAGTAAATTACCCATCATCAG CGCCATTAACATTGGCATATATCAATTAGCTAAAATTGAACCAACTTCATATCAAAGTGAAAACGATGGACTGCTATTTA GACATGTCGTTCCATCACTAAAAGGGCGAAATGATAAATCCTCACACGGTTCAAAACATACTTTTGGTCATCATGTCGAT AATCCTGATCTTCCCCTTACTAATGAAAAAATAACAGATAAAAGTGGCTGTCCAGAGTTCCTATCTCTAATGTCACTACG CTCAGATCTAAAAGTTAAATCTAATTTCATACTCGTTGATGACGTACTTAATCAATTAAGTAACGGAGTTATTGAACAGT TGAGTAAACCTCACTTTGAAATTTCAAGACCGGATTCATTTAAACAATCTGTTAAAACAATTCTCCCACTTATCAGCTTT GATAATGATGGAGTGGCCTACTGCCGTTACGACAAAGAAAATACAACACCACTCACAACAGAAGCTGCAGCCGCTCTTGT TATGTGGGAAGCACAACTCAAAAATACAGAGTTAAATAATGCCATTACTTATCAACCTGGCGATTTCTTAATCATAAAAA ATCAACGCTTAATGCATAGCAGAGAAGGATTTTCACCACGAGATGACGGAACAGATCGCTGGTTAATTCGCTTATTCGGC ATGAGCTCATTAGAACGAATTATCCCTATTAATGAAGAAAATAAACATATTGCACAAGACTAG
Upstream 100 bases:
>100_bases TTATGAATGAAATACTTTAATACAATTTAATTGACATATGTCACTAGGTTGTTTTATAGTCAACTCTCAGTTGGTAATTA ACATATAGGACATACGGAAA
Downstream 100 bases:
>100_bases GAGCATAGAATGGAAGCACAAAAAGTAGCATTTATTGGATTAGGTGTAATGGGATACCCAATGGCTGGGCACTTACAACA CTCAGGACTAGAGACAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: L-asparagine 3-hydroxylase [H]
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MFNLKKESSQELLKIIEIHIPYDSARKLSSAFSHLRLGDDKSWLRTSHWFGTTIKHCLIKELNYKISNFKENKDQQALII RGLPIDQNLCKTPYNGYVSPSKLPIISAINIGIYQLAKIEPTSYQSENDGLLFRHVVPSLKGRNDKSSHGSKHTFGHHVD NPDLPLTNEKITDKSGCPEFLSLMSLRSDLKVKSNFILVDDVLNQLSNGVIEQLSKPHFEISRPDSFKQSVKTILPLISF DNDGVAYCRYDKENTTPLTTEAAAALVMWEAQLKNTELNNAITYQPGDFLIIKNQRLMHSREGFSPRDDGTDRWLIRLFG MSSLERIIPINEENKHIAQD
Sequences:
>Translated_340_residues MFNLKKESSQELLKIIEIHIPYDSARKLSSAFSHLRLGDDKSWLRTSHWFGTTIKHCLIKELNYKISNFKENKDQQALII RGLPIDQNLCKTPYNGYVSPSKLPIISAINIGIYQLAKIEPTSYQSENDGLLFRHVVPSLKGRNDKSSHGSKHTFGHHVD NPDLPLTNEKITDKSGCPEFLSLMSLRSDLKVKSNFILVDDVLNQLSNGVIEQLSKPHFEISRPDSFKQSVKTILPLISF DNDGVAYCRYDKENTTPLTTEAAAALVMWEAQLKNTELNNAITYQPGDFLIIKNQRLMHSREGFSPRDDGTDRWLIRLFG MSSLERIIPINEENKHIAQD >Mature_340_residues MFNLKKESSQELLKIIEIHIPYDSARKLSSAFSHLRLGDDKSWLRTSHWFGTTIKHCLIKELNYKISNFKENKDQQALII RGLPIDQNLCKTPYNGYVSPSKLPIISAINIGIYQLAKIEPTSYQSENDGLLFRHVVPSLKGRNDKSSHGSKHTFGHHVD NPDLPLTNEKITDKSGCPEFLSLMSLRSDLKVKSNFILVDDVLNQLSNGVIEQLSKPHFEISRPDSFKQSVKTILPLISF DNDGVAYCRYDKENTTPLTTEAAAALVMWEAQLKNTELNNAITYQPGDFLIIKNQRLMHSREGFSPRDDGTDRWLIRLFG MSSLERIIPINEENKHIAQD
Specific function: Catalyzes the 3-hydroxylation of L-asparagine to (2S,3S)-3-hydroxyasparagine. The 3-hydroxylated asparagine produced is incorporated at position 9 during the biosynthesis of the non-ribosomally synthesized calcium-dependent antibiotic (CDA), a 11-residue
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the clavaminate synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014503 - InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: NA
Molecular weight: Translated: 38736; Mature: 38736
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNLKKESSQELLKIIEIHIPYDSARKLSSAFSHLRLGDDKSWLRTSHWFGTTIKHCLIK CCCCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ELNYKISNFKENKDQQALIIRGLPIDQNLCKTPYNGYVSPSKLPIISAINIGIYQLAKIE HHCCHHHCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCEEEEECCCEEEEEEEC PTSYQSENDGLLFRHVVPSLKGRNDKSSHGSKHTFGHHVDNPDLPLTNEKITDKSGCPEF CCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LSLMSLRSDLKVKSNFILVDDVLNQLSNGVIEQLSKPHFEISRPDSFKQSVKTILPLISF HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHEE DNDGVAYCRYDKENTTPLTTEAAAALVMWEAQLKNTELNNAITYQPGDFLIIKNQRLMHS CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCHHHHH REGFSPRDDGTDRWLIRLFGMSSLERIIPINEENKHIAQD CCCCCCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MFNLKKESSQELLKIIEIHIPYDSARKLSSAFSHLRLGDDKSWLRTSHWFGTTIKHCLIK CCCCCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ELNYKISNFKENKDQQALIIRGLPIDQNLCKTPYNGYVSPSKLPIISAINIGIYQLAKIE HHCCHHHCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCEEEEECCCEEEEEEEC PTSYQSENDGLLFRHVVPSLKGRNDKSSHGSKHTFGHHVDNPDLPLTNEKITDKSGCPEF CCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LSLMSLRSDLKVKSNFILVDDVLNQLSNGVIEQLSKPHFEISRPDSFKQSVKTILPLISF HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHEE DNDGVAYCRYDKENTTPLTTEAAAALVMWEAQLKNTELNNAITYQPGDFLIIKNQRLMHS CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCHHHHH REGFSPRDDGTDRWLIRLFGMSSLERIIPINEENKHIAQD CCCCCCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]