| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694818
Identifier: 209694818
GI number: 209694818
Start: 1393885
End: 1394196
Strand: Direct
Name: 209694818
Synonym: VSAL_I1283
Alternate gene names: NA
Gene position: 1393885-1394196 (Clockwise)
Preceding gene: 209694817
Following gene: 209694819
Centisome position: 41.92
GC content: 33.01
Gene sequence:
>312_bases GTGCGAGTTATTTCAAAACCAATTCTTATAGAGTTTTACTCAAATCCACTCTATAAAGATTCAGAAGAAGCATTAAAAGC GTGGCACGATGAGGTTATTCAAGCAGATTGGAATACTCCTCATGAAATAAAAGCACAGTATACAAACGCAAGTATTGTAG GAAATAAAAGGGTAGTTTTTAATATTTGTGGTAACAAATATAGATTGATTGTTTCAGTGAGCTATCGTTTAAAGGCTTTC TACGTGAAGTTTGTAGGGACACATAAACAATATGATAACGTTGATGCCGAAACCATCGATTTATTCAAATAA
Upstream 100 bases:
>100_bases ATTACTTTTTTACCTTTGATATTCCCAAAGCGGGAAAATCGAGTTGACATTTTGTACAGTTATTCCCATAATGGGAACTC AATTATAGAACGGAGGCTAT
Downstream 100 bases:
>100_bases CAATGCAGTGGTAATAAATTATGAATATTAAGCCAATTAGAACTAAAGATGATTACAAAGCAGCTATGGCTCGTATCAGT GAGCTTACTAGCGGCGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVFNICGNKYRLIVSVSYRLKAF YVKFVGTHKQYDNVDAETIDLFK
Sequences:
>Translated_103_residues MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVFNICGNKYRLIVSVSYRLKAF YVKFVGTHKQYDNVDAETIDLFK >Mature_103_residues MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVFNICGNKYRLIVSVSYRLKAF YVKFVGTHKQYDNVDAETIDLFK
Specific function: Unknown
COG id: COG4680
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12045; Mature: 12045
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVF CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEEECCEEEECCCEEEE NICGNKYRLIVSVSYRLKAFYVKFVGTHKQYDNVDAETIDLFK EECCCEEEEEEEEECEEEEEEEEEECCCCCCCCCCCCEEEECC >Mature Secondary Structure MRVISKPILIEFYSNPLYKDSEEALKAWHDEVIQADWNTPHEIKAQYTNASIVGNKRVVF CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEEECCEEEECCCEEEE NICGNKYRLIVSVSYRLKAFYVKFVGTHKQYDNVDAETIDLFK EECCCEEEEEEEEECEEEEEEEEEECCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA