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The map label for this gene is 209694819

Identifier: 209694819

GI number: 209694819

Start: 1394217

End: 1394594

Strand: Direct

Name: 209694819

Synonym: VSAL_I1284

Alternate gene names: NA

Gene position: 1394217-1394594 (Clockwise)

Preceding gene: 209694818

Following gene: 209694820

Centisome position: 41.93

GC content: 35.45

Gene sequence:

>378_bases
ATGAATATTAAGCCAATTAGAACTAAAGATGATTACAAAGCAGCTATGGCTCGTATCAGTGAGCTTACTAGCGGCGATCC
TGATGCATTACCTGATATTGAGTTTGATGAATTAGAAATTTTAACCACTTTAGTTGAAGCATACGAAAACGTTCATTATA
AAATTGAAGCACCAGATCCAGTAGAAGCAATTAAATTCAGAATGGAACAGCTTGGGTTAAGTGATAGTGACTTAACACCA
ATATTAGGGCAACGCAGCCGAGTTACTGAGATTTTAAAAAGAAAGAGACGACTTTCACTCACCATGATTAGAAGCTTAAA
TAGTAAGTTGAACATTCCACTTGAGAGTCTTATTGGCGAATATCAACTTGCTAAATAA

Upstream 100 bases:

>100_bases
AGGCTTTCTACGTGAAGTTTGTAGGGACACATAAACAATATGATAACGTTGATGCCGAAACCATCGATTTATTCAAATAA
CAATGCAGTGGTAATAAATT

Downstream 100 bases:

>100_bases
TCATCTGACTCTTGGTGACAACACTCAACTTCAAACGCTCCTATTTAGGGGCGTTTTTATTTAAGTGAAACTAGGCGATG
ATTTCCTGAAGGAATCATAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Regulator With HTH Domain; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; XRE Family Transcriptional Regulator; Transcription Regulator; Transcription Regulator With HTH Domain Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator Xre Family; Transcription Regulator Containing HTH Domain; Transcription Regulator Protein; Transcritional Regulatior Protein; Transcription Regulator Containing Helix Turn Helix Domain; HTH_3 Family Transcriptional Regulator Protein; HTH-Type Transcriptional Regulator YgjM; Transcriptional Regulator Protein; Transcription Regulator With HTH Domain-Containing Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MNIKPIRTKDDYKAAMARISELTSGDPDALPDIEFDELEILTTLVEAYENVHYKIEAPDPVEAIKFRMEQLGLSDSDLTP
ILGQRSRVTEILKRKRRLSLTMIRSLNSKLNIPLESLIGEYQLAK

Sequences:

>Translated_125_residues
MNIKPIRTKDDYKAAMARISELTSGDPDALPDIEFDELEILTTLVEAYENVHYKIEAPDPVEAIKFRMEQLGLSDSDLTP
ILGQRSRVTEILKRKRRLSLTMIRSLNSKLNIPLESLIGEYQLAK
>Mature_125_residues
MNIKPIRTKDDYKAAMARISELTSGDPDALPDIEFDELEILTTLVEAYENVHYKIEAPDPVEAIKFRMEQLGLSDSDLTP
ILGQRSRVTEILKRKRRLSLTMIRSLNSKLNIPLESLIGEYQLAK

Specific function: Unknown

COG id: COG5499

COG function: function code K; Predicted transcription regulator containing HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14259; Mature: 14259

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKPIRTKDDYKAAMARISELTSGDPDALPDIEFDELEILTTLVEAYENVHYKIEAPDP
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCH
VEAIKFRMEQLGLSDSDLTPILGQRSRVTEILKRKRRLSLTMIRSLNSKLNIPLESLIGE
HHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YQLAK
HHCCC
>Mature Secondary Structure
MNIKPIRTKDDYKAAMARISELTSGDPDALPDIEFDELEILTTLVEAYENVHYKIEAPDP
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCH
VEAIKFRMEQLGLSDSDLTPILGQRSRVTEILKRKRRLSLTMIRSLNSKLNIPLESLIGE
HHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
YQLAK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA