| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is gltP [H]
Identifier: 209694816
GI number: 209694816
Start: 1390096
End: 1391400
Strand: Reverse
Name: gltP [H]
Synonym: VSAL_I1281
Alternate gene names: 209694816
Gene position: 1391400-1390096 (Counterclockwise)
Preceding gene: 209694821
Following gene: 209694811
Centisome position: 41.84
GC content: 42.84
Gene sequence:
>1305_bases ATGACGAATGACAACAAAAAAATTAAAAGCTCTTTAACTGCTCGCATCATTACCGGCATGGTTGCTGGTATTTTATGTGG ATTTTTGATCCGTACTTTTTTAGGCGACAATAGTTTTATTAACGAGTACCTAGTCAATGGTTTGTTTGATGTTGGCGGAA AAATTTTCATTGCCAGCTTAAAAATGCTCGTAATTCCCCTTGTCTTTGTTTCCCTTGTTTGCGGTACAAGTTCTTTAAAA GACATGACAACATTAGGTCGATTAGGCGGTAAGACTCTCGCTTTCTATATCGGAACCACTGCGTTAGCCATCTCTTTAGC GCTCATCATGGGTATCTTCTTACACCCAGGAGCAGGTGCCGATCTAACCTCTGCGGCTTCTTTTAGCACAGCAGAAGCGC CTTCATTAGGCCAAGTTATTGTTGGCATGTTCCCAAGCAACCCGATGGCAGCAATGTCTCAAGGTAATACATTGCAAGTT ATCGTATTTGCGGTGCTATTTGGTATAGCCATCAGCCTTGCTGGAGAAGCAGGGCAACGTGTTTCTGATTTCTTTAGCGA CGTAAATGAAGTAATCATGAAGCTGGTTACGCTGCTAATGAAAGTAGCGCCTTACGGTATTTTCTTCTTAATGGCGAAAC TGTTTACTGGTTTAGGTTTAGATTCAATCGCAAACCTAGCGGCATACTTCTTAGTTCTTGTTGCGGCACTGCTTATTCAT GCCTTTGTCACTTACAGTATTCTTCTTAAAGTTCTTTCAGGCCTAAGCCCTATCGTATTTTGGAAGAAGATGAAAGATGC CATCATGTTTGCCTTTTCTACCGCCTCTTCTAATGCCACTATTCCAGTGACCATGGAAACGGCAACACATCGATTAGGTG TCAGTAATAAAGTCGCTTCATTTACCATTCCTCTTGGTGCCACCATTAATATGGATGGTACGGCCATCATGCAAGGGGTC GCAACGGCCTTTATTGCTCAAGCATTTGGCGTAGATCTAAGCATTGGGGATTACATGACAGTGATCCTAACAGCAACGCT TGCATCTGTAGGTACCGCTGGTGTCCCTGGCGTTGGTTTGATCATGTTAGCGATGGTATTAAACCAAGTAGGCTTACCTT TAGAAGGTATTGCACTCATCATGGGTGTTGACCGCTTACTTGACATGATCCGTACGGCGGTAAATATTACCGGTGACAGT GTGGTGACTTGTATTGTGGCTAAATCAGAAAATGAGTTAGACATTGATGCCTTTAATGATCCAAAAGCTGGTGAAGCGGA ACTCGCACTAAAAAGAAGTGCTTAA
Upstream 100 bases:
>100_bases AATGGACAAATTATAAATGTAACGAACAAGTTTCATTTTAGATCTGCTAACCTGCTCGCACTTTGAAAGTTGTACAAAGT AATTTAATGGAGATTAGTTC
Downstream 100 bases:
>100_bases TTAAATACGTATCTCTCGCTTAACCATAAAGGCCTCAACATCATGTTAAGGCCTTTATTTTTCAACTCATTTATTTATGC TTAAGCAAACGGATCTACGT
Product: sodium/dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MTNDNKKIKSSLTARIITGMVAGILCGFLIRTFLGDNSFINEYLVNGLFDVGGKIFIASLKMLVIPLVFVSLVCGTSSLK DMTTLGRLGGKTLAFYIGTTALAISLALIMGIFLHPGAGADLTSAASFSTAEAPSLGQVIVGMFPSNPMAAMSQGNTLQV IVFAVLFGIAISLAGEAGQRVSDFFSDVNEVIMKLVTLLMKVAPYGIFFLMAKLFTGLGLDSIANLAAYFLVLVAALLIH AFVTYSILLKVLSGLSPIVFWKKMKDAIMFAFSTASSNATIPVTMETATHRLGVSNKVASFTIPLGATINMDGTAIMQGV ATAFIAQAFGVDLSIGDYMTVILTATLASVGTAGVPGVGLIMLAMVLNQVGLPLEGIALIMGVDRLLDMIRTAVNITGDS VVTCIVAKSENELDIDAFNDPKAGEAELALKRSA
Sequences:
>Translated_434_residues MTNDNKKIKSSLTARIITGMVAGILCGFLIRTFLGDNSFINEYLVNGLFDVGGKIFIASLKMLVIPLVFVSLVCGTSSLK DMTTLGRLGGKTLAFYIGTTALAISLALIMGIFLHPGAGADLTSAASFSTAEAPSLGQVIVGMFPSNPMAAMSQGNTLQV IVFAVLFGIAISLAGEAGQRVSDFFSDVNEVIMKLVTLLMKVAPYGIFFLMAKLFTGLGLDSIANLAAYFLVLVAALLIH AFVTYSILLKVLSGLSPIVFWKKMKDAIMFAFSTASSNATIPVTMETATHRLGVSNKVASFTIPLGATINMDGTAIMQGV ATAFIAQAFGVDLSIGDYMTVILTATLASVGTAGVPGVGLIMLAMVLNQVGLPLEGIALIMGVDRLLDMIRTAVNITGDS VVTCIVAKSENELDIDAFNDPKAGEAELALKRSA >Mature_433_residues TNDNKKIKSSLTARIITGMVAGILCGFLIRTFLGDNSFINEYLVNGLFDVGGKIFIASLKMLVIPLVFVSLVCGTSSLKD MTTLGRLGGKTLAFYIGTTALAISLALIMGIFLHPGAGADLTSAASFSTAEAPSLGQVIVGMFPSNPMAAMSQGNTLQVI VFAVLFGIAISLAGEAGQRVSDFFSDVNEVIMKLVTLLMKVAPYGIFFLMAKLFTGLGLDSIANLAAYFLVLVAALLIHA FVTYSILLKVLSGLSPIVFWKKMKDAIMFAFSTASSNATIPVTMETATHRLGVSNKVASFTIPLGATINMDGTAIMQGVA TAFIAQAFGVDLSIGDYMTVILTATLASVGTAGVPGVGLIMLAMVLNQVGLPLEGIALIMGVDRLLDMIRTAVNITGDSV VTCIVAKSENELDIDAFNDPKAGEAELALKRSA
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=456, Percent_Identity=32.4561403508772, Blast_Score=206, Evalue=2e-53, Organism=Homo sapiens, GI40254478, Length=456, Percent_Identity=34.6491228070175, Blast_Score=195, Evalue=7e-50, Organism=Homo sapiens, GI66773030, Length=453, Percent_Identity=32.2295805739514, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI194239697, Length=463, Percent_Identity=29.8056155507559, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI21314632, Length=420, Percent_Identity=31.6666666666667, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI4827012, Length=289, Percent_Identity=37.7162629757785, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI5032093, Length=374, Percent_Identity=34.4919786096257, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI223468566, Length=258, Percent_Identity=36.4341085271318, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI223468564, Length=249, Percent_Identity=36.9477911646586, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI262359914, Length=382, Percent_Identity=29.5811518324607, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI301601644, Length=172, Percent_Identity=39.5348837209302, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI1790514, Length=421, Percent_Identity=35.8669833729216, Blast_Score=254, Evalue=9e-69, Organism=Escherichia coli, GI1789947, Length=385, Percent_Identity=31.9480519480519, Blast_Score=179, Evalue=4e-46, Organism=Escherichia coli, GI1788024, Length=453, Percent_Identity=28.476821192053, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1789473, Length=275, Percent_Identity=28.7272727272727, Blast_Score=102, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71983099, Length=475, Percent_Identity=34.1052631578947, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI71983106, Length=462, Percent_Identity=34.1991341991342, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI193206505, Length=439, Percent_Identity=35.0797266514806, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI71996953, Length=451, Percent_Identity=33.0376940133038, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17537407, Length=429, Percent_Identity=33.7995337995338, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI193206654, Length=431, Percent_Identity=31.554524361949, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17541374, Length=455, Percent_Identity=31.2087912087912, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI24583025, Length=464, Percent_Identity=30.6034482758621, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI17137668, Length=464, Percent_Identity=30.6034482758621, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24583023, Length=464, Percent_Identity=30.6034482758621, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI281360481, Length=459, Percent_Identity=29.4117647058824, Blast_Score=142, Evalue=6e-34, Organism=Drosophila melanogaster, GI281360483, Length=459, Percent_Identity=29.4117647058824, Blast_Score=141, Evalue=8e-34, Organism=Drosophila melanogaster, GI17137666, Length=459, Percent_Identity=29.4117647058824, Blast_Score=141, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 45427; Mature: 45295
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDNKKIKSSLTARIITGMVAGILCGFLIRTFLGDNSFINEYLVNGLFDVGGKIFIASL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH KMLVIPLVFVSLVCGTSSLKDMTTLGRLGGKTLAFYIGTTALAISLALIMGIFLHPGAGA HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC DLTSAASFSTAEAPSLGQVIVGMFPSNPMAAMSQGNTLQVIVFAVLFGIAISLAGEAGQR CCCCCCCCCCCCCCCCCHHHEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH VSDFFSDVNEVIMKLVTLLMKVAPYGIFFLMAKLFTGLGLDSIANLAAYFLVLVAALLIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AFVTYSILLKVLSGLSPIVFWKKMKDAIMFAFSTASSNATIPVTMETATHRLGVSNKVAS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEHHHHHHCCCCCCCEE FTIPLGATINMDGTAIMQGVATAFIAQAFGVDLSIGDYMTVILTATLASVGTAGVPGVGL EEECCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH IMLAMVLNQVGLPLEGIALIMGVDRLLDMIRTAVNITGDSVVTCIVAKSENELDIDAFND HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC PKAGEAELALKRSA CCCCCHHHHEECCC >Mature Secondary Structure TNDNKKIKSSLTARIITGMVAGILCGFLIRTFLGDNSFINEYLVNGLFDVGGKIFIASL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH KMLVIPLVFVSLVCGTSSLKDMTTLGRLGGKTLAFYIGTTALAISLALIMGIFLHPGAGA HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCC DLTSAASFSTAEAPSLGQVIVGMFPSNPMAAMSQGNTLQVIVFAVLFGIAISLAGEAGQR CCCCCCCCCCCCCCCCCHHHEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH VSDFFSDVNEVIMKLVTLLMKVAPYGIFFLMAKLFTGLGLDSIANLAAYFLVLVAALLIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AFVTYSILLKVLSGLSPIVFWKKMKDAIMFAFSTASSNATIPVTMETATHRLGVSNKVAS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEEHHHHHHCCCCCCCEE FTIPLGATINMDGTAIMQGVATAFIAQAFGVDLSIGDYMTVILTATLASVGTAGVPGVGL EEECCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH IMLAMVLNQVGLPLEGIALIMGVDRLLDMIRTAVNITGDSVVTCIVAKSENELDIDAFND HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC PKAGEAELALKRSA CCCCCHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]