| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694759
Identifier: 209694759
GI number: 209694759
Start: 1323029
End: 1323775
Strand: Direct
Name: 209694759
Synonym: VSAL_I1214
Alternate gene names: NA
Gene position: 1323029-1323775 (Clockwise)
Preceding gene: 209694756
Following gene: 209694760
Centisome position: 39.79
GC content: 38.02
Gene sequence:
>747_bases ATGAAATTTATGTTTAAACTTACTCTCGCATTACTAAGTTCGGTTATCGGCTTTAATGCAGCAGCAGAGCCTGTAGTTAA ACCGCTTCAATTTGAAGAAATCACGAATAATGTGTTTTTAGTTAAATCGTATCGTGAATTTAAAAACTTACAGAGCCCAA AGAAACCTATTTTGGTCGATGCTAATTCTTTAGTGTATGTTGATGGAAAGGATGCGTATTTGATTGATACGCCATGGAAT GCGTCGAACATGCCTCAGTTGATGACGTGGATTGAAAACAGAGGATTAACATTAAAGAAAACGGTCTTTTCTCATTTTCA TGAAGATCAAACTGGTGGTTTAGAATACCTGCAAGAACATCACTTTGAGACTTACGCGTCTGCATTAACGAACAAATTTT TGAAAGGTGATAACAAGAAAGCGACGAATCATCAATTTTCAGGTGATAATTTTGTGTTGTTAGAAAATAAGATTGAAGTT TTCTATCCGGGAGGAGGCCATACTAAAGACAATGCGGTGGTATGGTTACCAAAAGAAAAAGTATTACTTGGCGGTTGTTT AATGCGAGCAAATGAGGTGAATACGATTGGGTGGACTGGTGATGCCGATATGAAAGCATGGGCGGGGTCTGCTCAAAAAG TCTTAACGAAATACCCTCAAGCAAATTTTGTTGTTCCTGGACACGGGAACGTTGGTGAAGGGACGAGTATTATTAGTCAT ACTGTCGATATTACCGGAAAAATTTAG
Upstream 100 bases:
>100_bases ATAAACGAAGACTCCGTATTGATCTTAATGAATGTTTTACATTTAATTAACAGTAGTAAGAGGGAGAATATTGTATGTTT ACAGTTATATTTAAAAAGGA
Downstream 100 bases:
>100_bases CCAATCTTATGAAAAGGAATTTTGAGAAATAGTGCTTTTTTGTTTTTATATCGACTTTTAATATTTTATTATCGCTTTGC GATAAAATTATATTGATTTG
Product: mobile metallo-beta-lactamase
Products: NA
Alternate protein names: BLAIMP; Beta-lactamase type II; Penicillinase [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKFMFKLTLALLSSVIGFNAAAEPVVKPLQFEEITNNVFLVKSYREFKNLQSPKKPILVDANSLVYVDGKDAYLIDTPWN ASNMPQLMTWIENRGLTLKKTVFSHFHEDQTGGLEYLQEHHFETYASALTNKFLKGDNKKATNHQFSGDNFVLLENKIEV FYPGGGHTKDNAVVWLPKEKVLLGGCLMRANEVNTIGWTGDADMKAWAGSAQKVLTKYPQANFVVPGHGNVGEGTSIISH TVDITGKI
Sequences:
>Translated_248_residues MKFMFKLTLALLSSVIGFNAAAEPVVKPLQFEEITNNVFLVKSYREFKNLQSPKKPILVDANSLVYVDGKDAYLIDTPWN ASNMPQLMTWIENRGLTLKKTVFSHFHEDQTGGLEYLQEHHFETYASALTNKFLKGDNKKATNHQFSGDNFVLLENKIEV FYPGGGHTKDNAVVWLPKEKVLLGGCLMRANEVNTIGWTGDADMKAWAGSAQKVLTKYPQANFVVPGHGNVGEGTSIISH TVDITGKI >Mature_248_residues MKFMFKLTLALLSSVIGFNAAAEPVVKPLQFEEITNNVFLVKSYREFKNLQSPKKPILVDANSLVYVDGKDAYLIDTPWN ASNMPQLMTWIENRGLTLKKTVFSHFHEDQTGGLEYLQEHHFETYASALTNKFLKGDNKKATNHQFSGDNFVLLENKIEV FYPGGGHTKDNAVVWLPKEKVLLGGCLMRANEVNTIGWTGDADMKAWAGSAQKVLTKYPQANFVVPGHGNVGEGTSIISH TVDITGKI
Specific function: Confers resistance to imipenem and broad-spectrum beta- lactams. Also hydrolyzes carbapenems [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 27608; Mature: 27608
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFMFKLTLALLSSVIGFNAAAEPVVKPLQFEEITNNVFLVKSYREFKNLQSPKKPILVD CCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCEEEEECHHHHHHCCCCCCCEEEE ANSLVYVDGKDAYLIDTPWNASNMPQLMTWIENRGLTLKKTVFSHFHEDQTGGLEYLQEH CCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCEEHHHHHHHHCCCCCCCHHHHHHH HFETYASALTNKFLKGDNKKATNHQFSGDNFVLLENKIEVFYPGGGHTKDNAVVWLPKEK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCEEEEECCCC VLLGGCLMRANEVNTIGWTGDADMKAWAGSAQKVLTKYPQANFVVPGHGNVGEGTSIISH EEEHHHHEECCCCCEEECCCCCCHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCCEEEE TVDITGKI EEEEEECC >Mature Secondary Structure MKFMFKLTLALLSSVIGFNAAAEPVVKPLQFEEITNNVFLVKSYREFKNLQSPKKPILVD CCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHCCCEEEEECHHHHHHCCCCCCCEEEE ANSLVYVDGKDAYLIDTPWNASNMPQLMTWIENRGLTLKKTVFSHFHEDQTGGLEYLQEH CCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCEEHHHHHHHHCCCCCCCHHHHHHH HFETYASALTNKFLKGDNKKATNHQFSGDNFVLLENKIEVFYPGGGHTKDNAVVWLPKEK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCEEEEECCCC VLLGGCLMRANEVNTIGWTGDADMKAWAGSAQKVLTKYPQANFVVPGHGNVGEGTSIISH EEEHHHHEECCCCCEEECCCCCCHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCCEEEE TVDITGKI EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8141584 [H]