| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694738
Identifier: 209694738
GI number: 209694738
Start: 1298406
End: 1299218
Strand: Reverse
Name: 209694738
Synonym: VSAL_I1192
Alternate gene names: NA
Gene position: 1299218-1298406 (Counterclockwise)
Preceding gene: 209694741
Following gene: 209694736
Centisome position: 39.07
GC content: 39.48
Gene sequence:
>813_bases ATGATTAATGTAATAAAAATTGAAGAACTGAATGAACTTAGCACTCTAAAAGCAGAATATATAAATCAAGCAACAGCACC ATTAGATGGCATGTGGCTCTGTGGCTTTGTTCCAATGGCAACTCATTTTGGTTTTTATAACAATGAAGAATTGATAGGCT TTTGTTGCGTCAACAGTGATGGTTACTTATTGCAGTTTTATGTAAATCAACGTCATTACGTACACGCGGCTGATATTTTC ACTTCTGTTATTAGCAAAATAGAATCGCCAGCAGGTAAAGTGAATGGGGCTTTTGCAAGTACGGCTGAATCTCACTATTT TTCACTATGTCTTGATGAACAACAAGAAATGCAAGTGAATGGATTCATGTATCAACAAGTGAAAGCACTCACGACTCCTC AAGAGTCATACCTTACCATGGCAGTGGCAACGCTAGATCAACTCTCTGAGTTTGTTGAATTTGCAAAAGAAAACATCGGC GCACCCGAAGAATGGGTATCTGGCTATTATGCAAATTTAATCAGTCGCCAAGAACTCTTTGGCCATTGGAATGGATCTCA ACTTATCGCAGCAGGCGAACGTCGCTTATTTAATGAACATCAAACAAACTATGCGGATCTCGGGATGGTTGTTGCCACAT CTGAACGAGGAAAAGGACTGGGTGCACAAGTATTAAGGTACTTAGTTGCATTAGCAAACAGCCAAGGATTAACGGCCATG TGCTCAACTGAAAAATCGAATATCGCCTCACAAAAAGCCATTACTCATGCAGGTTTTTCCTCATCACACCGTATTGTTCA GTTTGATTTTTAA
Upstream 100 bases:
>100_bases ATTTATATCTACTATTACTCCTAAGAAATAATTCAAAATAATAAACAGATAAATGATGGCCTGATGCGTCATTTAGTCTT TCTCTATACAGGTAGAAACA
Downstream 100 bases:
>100_bases TCTTAGCGTTAATCACTAATCATCAAAAAAGCTAACCAATCAACTCTAATGGTTAGCTTTTTTATTTCTATTTATAACGA CTCAATACCACCATAAATAT
Product: acetyltransferase
Products: NA
Alternate protein names: Transferase; GNAT Family Acetyltransferase; Acetyltransferase Gnat Family
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MINVIKIEELNELSTLKAEYINQATAPLDGMWLCGFVPMATHFGFYNNEELIGFCCVNSDGYLLQFYVNQRHYVHAADIF TSVISKIESPAGKVNGAFASTAESHYFSLCLDEQQEMQVNGFMYQQVKALTTPQESYLTMAVATLDQLSEFVEFAKENIG APEEWVSGYYANLISRQELFGHWNGSQLIAAGERRLFNEHQTNYADLGMVVATSERGKGLGAQVLRYLVALANSQGLTAM CSTEKSNIASQKAITHAGFSSSHRIVQFDF
Sequences:
>Translated_270_residues MINVIKIEELNELSTLKAEYINQATAPLDGMWLCGFVPMATHFGFYNNEELIGFCCVNSDGYLLQFYVNQRHYVHAADIF TSVISKIESPAGKVNGAFASTAESHYFSLCLDEQQEMQVNGFMYQQVKALTTPQESYLTMAVATLDQLSEFVEFAKENIG APEEWVSGYYANLISRQELFGHWNGSQLIAAGERRLFNEHQTNYADLGMVVATSERGKGLGAQVLRYLVALANSQGLTAM CSTEKSNIASQKAITHAGFSSSHRIVQFDF >Mature_270_residues MINVIKIEELNELSTLKAEYINQATAPLDGMWLCGFVPMATHFGFYNNEELIGFCCVNSDGYLLQFYVNQRHYVHAADIF TSVISKIESPAGKVNGAFASTAESHYFSLCLDEQQEMQVNGFMYQQVKALTTPQESYLTMAVATLDQLSEFVEFAKENIG APEEWVSGYYANLISRQELFGHWNGSQLIAAGERRLFNEHQTNYADLGMVVATSERGKGLGAQVLRYLVALANSQGLTAM CSTEKSNIASQKAITHAGFSSSHRIVQFDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30038; Mature: 30038
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINVIKIEELNELSTLKAEYINQATAPLDGMWLCGFVPMATHFGFYNNEELIGFCCVNSD CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC GYLLQFYVNQRHYVHAADIFTSVISKIESPAGKVNGAFASTAESHYFSLCLDEQQEMQVN CEEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEEECCHHHHHHH GFMYQQVKALTTPQESYLTMAVATLDQLSEFVEFAKENIGAPEEWVSGYYANLISRQELF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GHWNGSQLIAAGERRLFNEHQTNYADLGMVVATSERGKGLGAQVLRYLVALANSQGLTAM CCCCCCEEEEHHHHHHHHHHCCCHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEE CSTEKSNIASQKAITHAGFSSSHRIVQFDF ECCCHHHHHHHHHHHHCCCCCCCEEEEECC >Mature Secondary Structure MINVIKIEELNELSTLKAEYINQATAPLDGMWLCGFVPMATHFGFYNNEELIGFCCVNSD CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC GYLLQFYVNQRHYVHAADIFTSVISKIESPAGKVNGAFASTAESHYFSLCLDEQQEMQVN CEEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEEECCHHHHHHH GFMYQQVKALTTPQESYLTMAVATLDQLSEFVEFAKENIGAPEEWVSGYYANLISRQELF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH GHWNGSQLIAAGERRLFNEHQTNYADLGMVVATSERGKGLGAQVLRYLVALANSQGLTAM CCCCCCEEEEHHHHHHHHHHCCCHHHCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEE CSTEKSNIASQKAITHAGFSSSHRIVQFDF ECCCHHHHHHHHHHHHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA