Click here to switch to the map view.

The map label for this gene is yrhP [H]

Identifier: 209694732

GI number: 209694732

Start: 1293881

End: 1294516

Strand: Reverse

Name: yrhP [H]

Synonym: VSAL_I1186

Alternate gene names: 209694732

Gene position: 1294516-1293881 (Counterclockwise)

Preceding gene: 209694736

Following gene: 209694714

Centisome position: 38.93

GC content: 40.25

Gene sequence:

>636_bases
ATGATTGATATATCTATTCTTCCAGTTTATTTGACTGCAGTAATTGCCCTTTTATTACTGCCGGGCCCAGACATGTTATT
AATTGCAAGCTCAAGCATGAGCTATGGCCGTAAGGTTGGCTTATTTGCTAGCTTGGGGAATGCTACATCTGGCATCATCT
TAACGCTGCTTGCCGCTTTAGGCGTTTCAACCTTAATTGCAATGAGCCCGCTCGCATTGAAAGCTCTGCATCTATTAGGT
GGCATATATTTATTAAAAATGGGTTGGGATTGCATTCGGGCTCAGGCTGATGAAGCACCAGAACTTGCTGATAGTTCAAA
AATGGCGACCACGTTTTACCAACGAGCTTTAGTCAGTAATTTACTGAACCCTAAAGCATTGGTTTTCTTTGTGATGTTTT
TACCACAGTTTGTTTCAACGAATATTGCCGCAACATCTGGTGAGCAAATGCTAGCACTTGGCTTATTACTGAATGTACTT
GGCCTGCTATTCAATTTACTTTTGGTTGCTTTAGTCGGTAGCCTTGGTAAATCACTAATTAACAACATAAAATTTAGAAC
GTATCAACACAAATTCATGGGAGGAATATTTATTATTCTCGCCTTATGGATGCTGAGCACGTTCTTCATCGCGTAA

Upstream 100 bases:

>100_bases
AATATATCGCGCTTATATTATTCAGCGACTTTTTAATCATGGATCTTGCCTTCTTACTACTATAAAATTCGCCTCTTAAT
TTATAATTCAAAATAAAATA

Downstream 100 bases:

>100_bases
TAATGAAAAAGCCAGTAACTGATTACTGGCTTTTTTCATTTCGGCTCTCTATTGCAGGGACTTCCATAAAGTATACAAAG
ATAACCACTCTTTTCGTACC

Product: lysine exporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MIDISILPVYLTAVIALLLLPGPDMLLIASSSMSYGRKVGLFASLGNATSGIILTLLAALGVSTLIAMSPLALKALHLLG
GIYLLKMGWDCIRAQADEAPELADSSKMATTFYQRALVSNLLNPKALVFFVMFLPQFVSTNIAATSGEQMLALGLLLNVL
GLLFNLLLVALVGSLGKSLINNIKFRTYQHKFMGGIFIILALWMLSTFFIA

Sequences:

>Translated_211_residues
MIDISILPVYLTAVIALLLLPGPDMLLIASSSMSYGRKVGLFASLGNATSGIILTLLAALGVSTLIAMSPLALKALHLLG
GIYLLKMGWDCIRAQADEAPELADSSKMATTFYQRALVSNLLNPKALVFFVMFLPQFVSTNIAATSGEQMLALGLLLNVL
GLLFNLLLVALVGSLGKSLINNIKFRTYQHKFMGGIFIILALWMLSTFFIA
>Mature_211_residues
MIDISILPVYLTAVIALLLLPGPDMLLIASSSMSYGRKVGLFASLGNATSGIILTLLAALGVSTLIAMSPLALKALHLLG
GIYLLKMGWDCIRAQADEAPELADSSKMATTFYQRALVSNLLNPKALVFFVMFLPQFVSTNIAATSGEQMLALGLLLNVL
GLLFNLLLVALVGSLGKSLINNIKFRTYQHKFMGGIFIILALWMLSTFFIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=140, Percent_Identity=35, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1786522, Length=140, Percent_Identity=27.1428571428571, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI48994978, Length=151, Percent_Identity=30.4635761589404, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22654; Mature: 22654

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDISILPVYLTAVIALLLLPGPDMLLIASSSMSYGRKVGLFASLGNATSGIILTLLAAL
CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GVSTLIAMSPLALKALHLLGGIYLLKMGWDCIRAQADEAPELADSSKMATTFYQRALVSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHH
LLNPKALVFFVMFLPQFVSTNIAATSGEQMLALGLLLNVLGLLFNLLLVALVGSLGKSLI
HCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NNIKFRTYQHKFMGGIFIILALWMLSTFFIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIDISILPVYLTAVIALLLLPGPDMLLIASSSMSYGRKVGLFASLGNATSGIILTLLAAL
CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
GVSTLIAMSPLALKALHLLGGIYLLKMGWDCIRAQADEAPELADSSKMATTFYQRALVSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHH
LLNPKALVFFVMFLPQFVSTNIAATSGEQMLALGLLLNVLGLLFNLLLVALVGSLGKSLI
HCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NNIKFRTYQHKFMGGIFIILALWMLSTFFIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]