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The map label for this gene is vasC-1

Identifier: 209694726

GI number: 209694726

Start: 1284376

End: 1285320

Strand: Direct

Name: vasC-1

Synonym: VSAL_I1179

Alternate gene names: NA

Gene position: 1284376-1285320 (Clockwise)

Preceding gene: 209694725

Following gene: 209694727

Centisome position: 38.63

GC content: 35.45

Gene sequence:

>945_bases
ATGCCTATATCGATAAGAATAATTAGCTCGCCAGACGGAGAAAGTATCTCTGAGTGGAATAAACTACTTCCTGAAGAAGG
AGGAAGTATCGGTCGTGCTTTTGGTGCTTCTATTCAATTAAGTGATGCTATTCGAGAGGTCTCAGCCTCTCATGCCATCA
TTAAAAAAACATCTCGTGGTTATCAAATCATCGATGATAGTACTAATGGTTTATTTATTAATGGTTCAGATAAACCGCTT
GGTTTAAGTAATCAAACAGCATTAAATGATGGAGATATTCTTGATATCGGTCGTTATCGCTTATTGGTGTCTTGTTTTGT
TCCTGAACAAGCCCAGATACAGGATTTTTCAACGTTATCTGAAGACTTCTCATTAGGAGGTGACCCTTTTAATATCTCTG
AAGTTGAGCCTTCGTTTTCTTCAAGTTTTGTTCATAAAGAACCGGAATTAGATTTTGCGTTTTCTGATTGCAATATTATT
GGTGATAACCCGTTTAATATCGAAGATATAAAAAAAGTACAAGAACATAAAGAAGTAAATTTAAGCTTTGTGGCATTAGA
TGATGACCCATTTTCAGGTTCAGAGCTTCAATTAAATTTACCTTTAGAATCAAAGGAAGGTAAAGCCTCAATACAAGAAA
GCGCAGATGATAAATACGCATTTATAGTTGATCAAAAAAGTGAAGAACGAACGCAGCTACATATGAATAGAGCCCTAGAA
ATGGCGTTAACCCGTTTGTTGTCAGATATTTCACCTCATGCAATGGAAGATATGTTTGATGAGATTTCAAGACCAAGTTT
TTTTAGTGGTGTACCAAAATATTGGGATATGTATAAGCGTTATTTTACTCGACAAGTTGAAAACAAAGATTGGCAAATTA
AATTTCATGCTTATTTTCATGATGCAATCCGTCTGCAGCGTAACCTAGAACGAGGCAACAAATGA

Upstream 100 bases:

>100_bases
AACATCAATTGGATCTATTTTTCGAAATTATTTGTTAAAAAATTCCTACGGTTCTTAACTGAATTTAACCGTTCGATACA
ACAATGTAAGGGTAAATAAT

Downstream 100 bases:

>100_bases
GAAAGTGGTTAATGTCATCTATTGTTGTTTTGTTACTATCAGGTTGTAGTTTTAGTGGTGAAGAATTTACTCCTCAAGTT
GTACTTAATATAAAAGCTGC

Product: type VI secretion protein VasC-1

Products: NA

Alternate protein names: Type VI Secretion

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MPISIRIISSPDGESISEWNKLLPEEGGSIGRAFGASIQLSDAIREVSASHAIIKKTSRGYQIIDDSTNGLFINGSDKPL
GLSNQTALNDGDILDIGRYRLLVSCFVPEQAQIQDFSTLSEDFSLGGDPFNISEVEPSFSSSFVHKEPELDFAFSDCNII
GDNPFNIEDIKKVQEHKEVNLSFVALDDDPFSGSELQLNLPLESKEGKASIQESADDKYAFIVDQKSEERTQLHMNRALE
MALTRLLSDISPHAMEDMFDEISRPSFFSGVPKYWDMYKRYFTRQVENKDWQIKFHAYFHDAIRLQRNLERGNK

Sequences:

>Translated_314_residues
MPISIRIISSPDGESISEWNKLLPEEGGSIGRAFGASIQLSDAIREVSASHAIIKKTSRGYQIIDDSTNGLFINGSDKPL
GLSNQTALNDGDILDIGRYRLLVSCFVPEQAQIQDFSTLSEDFSLGGDPFNISEVEPSFSSSFVHKEPELDFAFSDCNII
GDNPFNIEDIKKVQEHKEVNLSFVALDDDPFSGSELQLNLPLESKEGKASIQESADDKYAFIVDQKSEERTQLHMNRALE
MALTRLLSDISPHAMEDMFDEISRPSFFSGVPKYWDMYKRYFTRQVENKDWQIKFHAYFHDAIRLQRNLERGNK
>Mature_313_residues
PISIRIISSPDGESISEWNKLLPEEGGSIGRAFGASIQLSDAIREVSASHAIIKKTSRGYQIIDDSTNGLFINGSDKPLG
LSNQTALNDGDILDIGRYRLLVSCFVPEQAQIQDFSTLSEDFSLGGDPFNISEVEPSFSSSFVHKEPELDFAFSDCNIIG
DNPFNIEDIKKVQEHKEVNLSFVALDDDPFSGSELQLNLPLESKEGKASIQESADDKYAFIVDQKSEERTQLHMNRALEM
ALTRLLSDISPHAMEDMFDEISRPSFFSGVPKYWDMYKRYFTRQVENKDWQIKFHAYFHDAIRLQRNLERGNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35504; Mature: 35373

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISIRIISSPDGESISEWNKLLPEEGGSIGRAFGASIQLSDAIREVSASHAIIKKTSRG
CCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCC
YQIIDDSTNGLFINGSDKPLGLSNQTALNDGDILDIGRYRLLVSCFVPEQAQIQDFSTLS
CEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEHHHHEEEEEEECCCHHHHHHHHHHH
EDFSLGGDPFNISEVEPSFSSSFVHKEPELDFAFSDCNIIGDNPFNIEDIKKVQEHKEVN
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHCCC
LSFVALDDDPFSGSELQLNLPLESKEGKASIQESADDKYAFIVDQKSEERTQLHMNRALE
EEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
MALTRLLSDISPHAMEDMFDEISRPSFFSGVPKYWDMYKRYFTRQVENKDWQIKFHAYFH
HHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHH
DAIRLQRNLERGNK
HHHHHHHHHHCCCC
>Mature Secondary Structure 
PISIRIISSPDGESISEWNKLLPEEGGSIGRAFGASIQLSDAIREVSASHAIIKKTSRG
CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCC
YQIIDDSTNGLFINGSDKPLGLSNQTALNDGDILDIGRYRLLVSCFVPEQAQIQDFSTLS
CEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEHHHHEEEEEEECCCHHHHHHHHHHH
EDFSLGGDPFNISEVEPSFSSSFVHKEPELDFAFSDCNIIGDNPFNIEDIKKVQEHKEVN
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHCCC
LSFVALDDDPFSGSELQLNLPLESKEGKASIQESADDKYAFIVDQKSEERTQLHMNRALE
EEEEEECCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
MALTRLLSDISPHAMEDMFDEISRPSFFSGVPKYWDMYKRYFTRQVENKDWQIKFHAYFH
HHHHHHHHHCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHH
DAIRLQRNLERGNK
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA