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The map label for this gene is trpH [H]

Identifier: 209694704

GI number: 209694704

Start: 1256941

End: 1257786

Strand: Direct

Name: trpH [H]

Synonym: VSAL_I1155

Alternate gene names: 209694704

Gene position: 1256941-1257786 (Clockwise)

Preceding gene: 209694693

Following gene: 209694705

Centisome position: 37.8

GC content: 42.91

Gene sequence:

>846_bases
ATGAAAATAGACCTACATAGTCACACAACTGCGTCAGATGGACGCTTATCACCGACAGAATTAGTAGAAAGAGCGGTGAA
TTTTGATGTTAAAGTTTTTGCTATTACCGATCACGATACGGTTGCTGGTTTAGCTGAGGCCCATAAAGCGATAAAAGAGA
AAGATCTGCCATTGCATTTAATTGATGGCATTGAGATCTCTACGCTGTGGAGCAATAAAGATATTCACGTCGTGGGGTTG
AATTTAGATATTAATCATCCTGAATTATTAGCGTTAATTGAGCAACAAGAAGCTCGCAGAATTGCGCGTGCAGAGAAAAT
GGCTGAGCGTCTAGAAAGAGCGGGTTATCCCGGAGCTCTGGAAGGGGCAAAAGCACTTGCTAACGGTGGGACTTTAACTC
GTGCTCATTTTGGTAAATGGTTGGTTGATCAAGGTTACGCAAAAACCATGCAAGCGGTTTTTAAAAAATTCTTAACTCGA
AACAATATTGGATATGTTCCACCAGAGTGGTGTTCTATTGAAGAAGCGGTTGAGGTAATACATAACGCAGGAGGGAAGGC
AATATTAGCCCACCCAGGCCGCTATAATTTAACTGCAAAATGGATTAAGCGTTTACTTGCTGCTTTTGTTGAAGCAAAAG
GGGACGCGATGGAAGTCGCTTTACCACAGCAAGGGGTTCAAGAGCGCCGAGTACTTGCTGATTACGCGATTCATTTTGAC
TTATTAGTGTCACAAGGTTCGGATTTCCATTATCCATCCCCGTGGACCGAATTAGGCCGAAATTTATGGTTACCAGCAGG
GGTTGTTCCTGTATGGCAAGATTGGGCTTTACCTACATTTGAATAG

Upstream 100 bases:

>100_bases
GCATAAAGTACCTATATTAGAAATCATTATAAATAAACATAAGAAAGTGTTTAACTGCGTACTAGTAAACTAGTGCGAGG
AATAAAAGTCAAGAATAATT

Downstream 100 bases:

>100_bases
AAAAGTGAATTTAGAATAAAAAACTAAAATAAAACCACTGTTTATACTATTACCTGCGGAGCAGGAGGACTTATGAGTCA
ATTTTTTTATGTACACCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKIDLHSHTTASDGRLSPTELVERAVNFDVKVFAITDHDTVAGLAEAHKAIKEKDLPLHLIDGIEISTLWSNKDIHVVGL
NLDINHPELLALIEQQEARRIARAEKMAERLERAGYPGALEGAKALANGGTLTRAHFGKWLVDQGYAKTMQAVFKKFLTR
NNIGYVPPEWCSIEEAVEVIHNAGGKAILAHPGRYNLTAKWIKRLLAAFVEAKGDAMEVALPQQGVQERRVLADYAIHFD
LLVSQGSDFHYPSPWTELGRNLWLPAGVVPVWQDWALPTFE

Sequences:

>Translated_281_residues
MKIDLHSHTTASDGRLSPTELVERAVNFDVKVFAITDHDTVAGLAEAHKAIKEKDLPLHLIDGIEISTLWSNKDIHVVGL
NLDINHPELLALIEQQEARRIARAEKMAERLERAGYPGALEGAKALANGGTLTRAHFGKWLVDQGYAKTMQAVFKKFLTR
NNIGYVPPEWCSIEEAVEVIHNAGGKAILAHPGRYNLTAKWIKRLLAAFVEAKGDAMEVALPQQGVQERRVLADYAIHFD
LLVSQGSDFHYPSPWTELGRNLWLPAGVVPVWQDWALPTFE
>Mature_281_residues
MKIDLHSHTTASDGRLSPTELVERAVNFDVKVFAITDHDTVAGLAEAHKAIKEKDLPLHLIDGIEISTLWSNKDIHVVGL
NLDINHPELLALIEQQEARRIARAEKMAERLERAGYPGALEGAKALANGGTLTRAHFGKWLVDQGYAKTMQAVFKKFLTR
NNIGYVPPEWCSIEEAVEVIHNAGGKAILAHPGRYNLTAKWIKRLLAAFVEAKGDAMEVALPQQGVQERRVLADYAIHFD
LLVSQGSDFHYPSPWTELGRNLWLPAGVVPVWQDWALPTFE

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=275, Percent_Identity=60, Blast_Score=340, Evalue=6e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31274; Mature: 31274

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDLHSHTTASDGRLSPTELVERAVNFDVKVFAITDHDTVAGLAEAHKAIKEKDLPLHL
CEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEE
IDGIEISTLWSNKDIHVVGLNLDINHPELLALIEQQEARRIARAEKMAERLERAGYPGAL
ECCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EGAKALANGGTLTRAHFGKWLVDQGYAKTMQAVFKKFLTRNNIGYVPPEWCSIEEAVEVI
HHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
HNAGGKAILAHPGRYNLTAKWIKRLLAAFVEAKGDAMEVALPQQGVQERRVLADYAIHFD
HCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
LLVSQGSDFHYPSPWTELGRNLWLPAGVVPVWQDWALPTFE
HHEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MKIDLHSHTTASDGRLSPTELVERAVNFDVKVFAITDHDTVAGLAEAHKAIKEKDLPLHL
CEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCEEE
IDGIEISTLWSNKDIHVVGLNLDINHPELLALIEQQEARRIARAEKMAERLERAGYPGAL
ECCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EGAKALANGGTLTRAHFGKWLVDQGYAKTMQAVFKKFLTRNNIGYVPPEWCSIEEAVEVI
HHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
HNAGGKAILAHPGRYNLTAKWIKRLLAAFVEAKGDAMEVALPQQGVQERRVLADYAIHFD
HCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHH
LLVSQGSDFHYPSPWTELGRNLWLPAGVVPVWQDWALPTFE
HHEECCCCCCCCCCHHHHCCCCCCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]