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The map label for this gene is ywbD [H]

Identifier: 209694693

GI number: 209694693

Start: 1245165

End: 1246130

Strand: Direct

Name: ywbD [H]

Synonym: VSAL_I1143

Alternate gene names: 209694693

Gene position: 1245165-1246130 (Clockwise)

Preceding gene: 209694692

Following gene: 209694704

Centisome position: 37.45

GC content: 40.99

Gene sequence:

>966_bases
ATGAAGATAGAAGCATTAGATACGTTATTTACGCATCTTGAACAGCAACTGACTCAGCCATTAGGTGAACTACGCCGCTT
ATTTCATGGTCGTGGTCAATGCTTTGAAGGATTAGAGCAAATCACGGTAGATTGGCTGCAAGCGAAAGACTCTCAGGGGC
AAGGCTCTCAAGGTCAACTAGTGGTGGCGTTATTTAAAGAGCAAGACCTTGAATTTGTAGAAGAGTTAGAAGCTAGACTA
AAAGCATTTGCAGATTCCGAGTTATGGACGAATGCGAAAGGGTCTTCTATCTTATTGCAACATCGTTACCAAGAATTAGC
GCCAACACAAGTGGTATGGGGAGACGAAAATACGTTTCCTGTCGTTGAAGAAAACGGTTTAAAGTACCAACTAGAGCTAA
AAAAGAACCAGAATATGGGTATCTTTTTAGACATGCGTTATGGTCGTCAGTGGGTTCAAGCACATAGCGAAGGCAAGTCA
GTATTAAACTTGTTTGCATATACGTGTGGTTTCTCTGTGGCTGCGATTGCTGGTGGTGCCACTCAAGTGGTTAACCTAGA
TATGGCGAAAGCGTCATTAGGTCGTGGGCGTGATAACCATCGCCTAAATGAACATGATCTTTCTAAAGTGAAATTCTTAG
GCCATGACATATTTAAGTCATGGGGAAAGATTAAGAAATTGGGTTTGTATGACTTGATCATTATTGATCCGCCAAGTTTT
CAAAAAGGCAGTTTTGCGTTAACTAAAGACTATCAAAAGATCTTACGTCGCCTACCTGATTTGTTAACAGAAAATGGAGA
GGTATTGGCGTGTGTGAATTCACCGGCAGTATCAACGGATTTCTTAACTGATGGTATGGCAGAAGAAGCACCAGAGTTGA
AATATATTGAGCGTTTAGATAATCCACCTGAGTTTGCTGATATTAATCCTGAAAGTGGGTTAAAAGTGATGCGATTTACT
CGCTAA

Upstream 100 bases:

>100_bases
CAAAACAAGGTGAAGAGTGGCAAGATGACACCGTTCAAGCAGGGTTAGCGCAATGGCAAACACCGTGGACATTAACTTGG
CCAGAGATTAAGAAGAAATC

Downstream 100 bases:

>100_bases
TTCATCTGAAACTGATGTTGTTTAAATTAAAAAATGCCTTTTCATATTTCTATTGAGAAGGCATTTTTAGTTTTAGATTA
TTTTTTTTCTGTTTGCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKIEALDTLFTHLEQQLTQPLGELRRLFHGRGQCFEGLEQITVDWLQAKDSQGQGSQGQLVVALFKEQDLEFVEELEARL
KAFADSELWTNAKGSSILLQHRYQELAPTQVVWGDENTFPVVEENGLKYQLELKKNQNMGIFLDMRYGRQWVQAHSEGKS
VLNLFAYTCGFSVAAIAGGATQVVNLDMAKASLGRGRDNHRLNEHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSF
QKGSFALTKDYQKILRRLPDLLTENGEVLACVNSPAVSTDFLTDGMAEEAPELKYIERLDNPPEFADINPESGLKVMRFT
R

Sequences:

>Translated_321_residues
MKIEALDTLFTHLEQQLTQPLGELRRLFHGRGQCFEGLEQITVDWLQAKDSQGQGSQGQLVVALFKEQDLEFVEELEARL
KAFADSELWTNAKGSSILLQHRYQELAPTQVVWGDENTFPVVEENGLKYQLELKKNQNMGIFLDMRYGRQWVQAHSEGKS
VLNLFAYTCGFSVAAIAGGATQVVNLDMAKASLGRGRDNHRLNEHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSF
QKGSFALTKDYQKILRRLPDLLTENGEVLACVNSPAVSTDFLTDGMAEEAPELKYIERLDNPPEFADINPESGLKVMRFT
R
>Mature_321_residues
MKIEALDTLFTHLEQQLTQPLGELRRLFHGRGQCFEGLEQITVDWLQAKDSQGQGSQGQLVVALFKEQDLEFVEELEARL
KAFADSELWTNAKGSSILLQHRYQELAPTQVVWGDENTFPVVEENGLKYQLELKKNQNMGIFLDMRYGRQWVQAHSEGKS
VLNLFAYTCGFSVAAIAGGATQVVNLDMAKASLGRGRDNHRLNEHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSF
QKGSFALTKDYQKILRRLPDLLTENGEVLACVNSPAVSTDFLTDGMAEEAPELKYIERLDNPPEFADINPESGLKVMRFT
R

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=193, Percent_Identity=32.1243523316062, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787181, Length=194, Percent_Identity=28.8659793814433, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 36278; Mature: 36278

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIEALDTLFTHLEQQLTQPLGELRRLFHGRGQCFEGLEQITVDWLQAKDSQGQGSQGQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
VVALFKEQDLEFVEELEARLKAFADSELWTNAKGSSILLQHRYQELAPTQVVWGDENTFP
EEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCC
VVEENGLKYQLELKKNQNMGIFLDMRYGRQWVQAHSEGKSVLNLFAYTCGFSVAAIAGGA
EEECCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
TQVVNLDMAKASLGRGRDNHRLNEHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSF
CEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
QKGSFALTKDYQKILRRLPDLLTENGEVLACVNSPAVSTDFLTDGMAEEAPELKYIERLD
CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCHHHCCCHHHHHHHCC
NPPEFADINPESGLKVMRFTR
CCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKIEALDTLFTHLEQQLTQPLGELRRLFHGRGQCFEGLEQITVDWLQAKDSQGQGSQGQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCE
VVALFKEQDLEFVEELEARLKAFADSELWTNAKGSSILLQHRYQELAPTQVVWGDENTFP
EEEEECCCCHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCC
VVEENGLKYQLELKKNQNMGIFLDMRYGRQWVQAHSEGKSVLNLFAYTCGFSVAAIAGGA
EEECCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC
TQVVNLDMAKASLGRGRDNHRLNEHDLSKVKFLGHDIFKSWGKIKKLGLYDLIIIDPPSF
CEEEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
QKGSFALTKDYQKILRRLPDLLTENGEVLACVNSPAVSTDFLTDGMAEEAPELKYIERLD
CCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHCCHHHCCCHHHHHHHCC
NPPEFADINPESGLKVMRFTR
CCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]