| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is hisC
Identifier: 209694685
GI number: 209694685
Start: 1238690
End: 1239730
Strand: Direct
Name: hisC
Synonym: VSAL_I1135
Alternate gene names: 209694685
Gene position: 1238690-1239730 (Clockwise)
Preceding gene: 209694684
Following gene: 209694686
Centisome position: 37.25
GC content: 40.06
Gene sequence:
>1041_bases ATGGAAAAATTAGCTCGTAAACAAGTTCAAGCCTTGACGCCGTATCTATCGGCTCGTCGTATTGGTGGCAGTGGTGATGT TTGGCTTAATGCTAATGAGTCCCCATTTGATAATGAGTATAACGTAAATTTTACTCGTCTAAATCGTTACAGTGAGTGTC AGCCTCCAGAATTGATTAATGCTTATGCTGCTTATGCAAAAGTAACAGCAGAGCAGGTGCTGACTTCTCGAGGTGCTGAC GAGGGTATTGAGTTATTAATTCGTGCTTTTTGTGAGCCAAATGAAGACGCGATTTTATATTGTCCACCAACCTATGGTAT GTATTCCATCAGTGCTGAGACGATTGGGGTTGAGACTAAAACAATACCTTTAACATCAGAATGGCAGCTTGATCTTCCAA GCATTGAACGCAATTTAGACAATGTAAAATTGGTCTTTGTATGTAGTCCAAATAACCCAACAGGTAATGTGATTAACCGT AAGGATATTTTGTCTTTATTAGAGATGACAAAAGATCGTGCGATTGTGGTGATGGATGAAGCTTATATTGATTTTTGTAT GGAAGTGTCAACCGTTGATTTATTGGCGACATACCCCAATTTAGCCATTTTACGAACGCTATCCAAAGCATTTGCCTTAG CGGGATTACGCTGTGGTTTCACTCTTGCAAATAAAGAGTTGATTGATGTGTTATCTAAAGTGATTGCTCCGTACCCTGTT CCTGTTCCTGTCGCTGACATTGCAACTCAAGCATTATCAGAAGCAGGTTTAGCCCGCATGAAATACCAAATGCTTGATTT AAGCGCCAACCGTGCTTATTTGCACGCAGGATTAATGGTATTGAATGGAGTTACTGTTCATGAAGGTTGGGGTAACTATT TATTAGTGCAGTTCTCTGATGGCGATGCAGTGTTTAAAGCAGCATGGGATCACGGCATTATTTTACGTAATTCACCAATT AAAGATTGTGTGCGTATTAGTGTGGGTAACCGCGAAGAGTGTGAGAAAACATTAGGCTTTATTCGTAACCAATTAATGTG A
Upstream 100 bases:
>100_bases TTGTCACAATGGCTGATGCTGAAGGGCTAGATGCACATAAACGTGCCGTGACTATTCGAATTGAAAAATTAGCTAAATTG AATTAATAGAGACCATAGAT
Downstream 100 bases:
>100_bases TTTTATCCCCGAAAGCTTAGGAATAAGGCTTGGGGCTTATCAAGAATAAAACAAGAAAAAATTAAAAGGAAGTTCCTGTG AGCAAACAACAAAAGATTTT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYNVNFTRLNRYSECQPPELINAYAAYAKVTAEQVLTSRGAD EGIELLIRAFCEPNEDAILYCPPTYGMYSISAETIGVETKTIPLTSEWQLDLPSIERNLDNVKLVFVCSPNNPTGNVINR KDILSLLEMTKDRAIVVMDEAYIDFCMEVSTVDLLATYPNLAILRTLSKAFALAGLRCGFTLANKELIDVLSKVIAPYPV PVPVADIATQALSEAGLARMKYQMLDLSANRAYLHAGLMVLNGVTVHEGWGNYLLVQFSDGDAVFKAAWDHGIILRNSPI KDCVRISVGNREECEKTLGFIRNQLM
Sequences:
>Translated_346_residues MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYNVNFTRLNRYSECQPPELINAYAAYAKVTAEQVLTSRGAD EGIELLIRAFCEPNEDAILYCPPTYGMYSISAETIGVETKTIPLTSEWQLDLPSIERNLDNVKLVFVCSPNNPTGNVINR KDILSLLEMTKDRAIVVMDEAYIDFCMEVSTVDLLATYPNLAILRTLSKAFALAGLRCGFTLANKELIDVLSKVIAPYPV PVPVADIATQALSEAGLARMKYQMLDLSANRAYLHAGLMVLNGVTVHEGWGNYLLVQFSDGDAVFKAAWDHGIILRNSPI KDCVRISVGNREECEKTLGFIRNQLM >Mature_346_residues MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYNVNFTRLNRYSECQPPELINAYAAYAKVTAEQVLTSRGAD EGIELLIRAFCEPNEDAILYCPPTYGMYSISAETIGVETKTIPLTSEWQLDLPSIERNLDNVKLVFVCSPNNPTGNVINR KDILSLLEMTKDRAIVVMDEAYIDFCMEVSTVDLLATYPNLAILRTLSKAFALAGLRCGFTLANKELIDVLSKVIAPYPV PVPVADIATQALSEAGLARMKYQMLDLSANRAYLHAGLMVLNGVTVHEGWGNYLLVQFSDGDAVFKAAWDHGIILRNSPI KDCVRISVGNREECEKTLGFIRNQLM
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=346, Percent_Identity=59.5375722543353, Blast_Score=414, Evalue=1e-117, Organism=Saccharomyces cerevisiae, GI6322075, Length=378, Percent_Identity=32.2751322751323, Blast_Score=169, Evalue=7e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_ALISL (B6EJ89)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002262613.1 - ProteinModelPortal: B6EJ89 - GeneID: 6988663 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I1135 - HOGENOM: HBG646350 - OMA: FKTLWDQ - ProtClustDB: PRK04635 - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 38396; Mature: 38396
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYNVNFTRLNRYSECQPPELIN CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHH AYAAYAKVTAEQVLTSRGADEGIELLIRAFCEPNEDAILYCPPTYGMYSISAETIGVETK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCEECCEEE TIPLTSEWQLDLPSIERNLDNVKLVFVCSPNNPTGNVINRKDILSLLEMTKDRAIVVMDE EECCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEH AYIDFCMEVSTVDLLATYPNLAILRTLSKAFALAGLRCGFTLANKELIDVLSKVIAPYPV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHCCCCC PVPVADIATQALSEAGLARMKYQMLDLSANRAYLHAGLMVLNGVTVHEGWGNYLLVQFSD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEECC GDAVFKAAWDHGIILRNSPIKDCVRISVGNREECEKTLGFIRNQLM CCEEEEEECCCCEEEECCCHHHHHEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKLARKQVQALTPYLSARRIGGSGDVWLNANESPFDNEYNVNFTRLNRYSECQPPELIN CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHH AYAAYAKVTAEQVLTSRGADEGIELLIRAFCEPNEDAILYCPPTYGMYSISAETIGVETK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCEECCEEE TIPLTSEWQLDLPSIERNLDNVKLVFVCSPNNPTGNVINRKDILSLLEMTKDRAIVVMDE EECCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEH AYIDFCMEVSTVDLLATYPNLAILRTLSKAFALAGLRCGFTLANKELIDVLSKVIAPYPV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHCCCCC PVPVADIATQALSEAGLARMKYQMLDLSANRAYLHAGLMVLNGVTVHEGWGNYLLVQFSD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEECC GDAVFKAAWDHGIILRNSPIKDCVRISVGNREECEKTLGFIRNQLM CCEEEEEECCCCEEEECCCHHHHHEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA