| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is hisD [H]
Identifier: 209694684
GI number: 209694684
Start: 1237380
End: 1238675
Strand: Direct
Name: hisD [H]
Synonym: VSAL_I1134
Alternate gene names: 209694684
Gene position: 1237380-1238675 (Clockwise)
Preceding gene: 209694683
Following gene: 209694685
Centisome position: 37.21
GC content: 42.21
Gene sequence:
>1296_bases ATGAAAACCCTAGTTTGGCAATCACTCAGTAATTCACAACAAGACACCGTCTTACAGCGTCCTGCTATTACCGAAGGCGC AAATATTACCGCTGCGGTAACTAGCGTGATTAATACCGTTAAACAAGATGGCGATGCTGGCGTGTTAGCGTTGACTGAAA AGTTTGATAAGGTGAAACCTGAATCCATTCGTGTATCTAAATCAGAGATTGATGCGGCAAGTGAACGTTTATCTGAAAAG ATGAAAGCGGCACTGCAACAAGCTTATAGCAATATTTCTAAGTTTCATAAAGCACAAAAGCCTCAGCCAATCAAAGTTGA AACTCAACCTGGTGTCGTATGTGAACAAATCACGATGCCAGTGAATAAAGTCGGCTTGTATATTCCGGGTGGCAGTGCAC CATTGCCTTCAACAGTATTAATGTTAGGCATTCCTGCACAGATTGCGGGCTGTCATAAAGTGGTACTTTGTTCGCCACCG CCGATTGCTGATGAGATCTTATACGTTGCAAAACTATGTAAAGTCGATGAGGTGTATAACATTGGTGGCGCACAAGCGAT TGCTGCTATGGCGTATGGTACTGAATCTGTTTCTAAAGTAGATAAGATCTTTGGCCCAGGTAACGCATACGTCACTGAAG CAAAACGCCAAGTTTCTAATGACTTTCGTGGTGCTGCTATTGATATGCCTGCGGGACCTTCTGAAGTCTTGGTTATTGCG GATGAAACGGCTGATCCTGATTTTATTGCGGCAGATCTTCTTAGCCAAGCTGAACATGGTCCTGATTCACAAGTTATCTT AGTCACGCCTTCGCCAATCATCGCTGATCAAGTTGCTGATGCCATCGAGAAGCAATTAAAAGAACTGACTCGTGCGGATA TCGCTCGTCAAGCGCTAGGTTCTAGTTTGTTGATTATTGCTAAATCATTGACGCAATGTGTTTCAATCTCAAACTTTTAT GGTCCTGAGCACTTGATTGTTCAAACTAAAAACCCACGTGAATTATTACCATTGCTAGATAATGCAGGTTCTATTTTCTT GGGTGAGTATTCTCCAGAATCAGCAGGGGATTATGCATCGGGTACAAACCATGTTTTACCAACTTATGGTTATACAAGAA CGCACTCAAGCTTAGGTTTAGCTGATTTTTCTAAACGCATGACAGTACAAGAGTTAACTGCTGATGGTTTAAAAGGGTTA GCGCCAACGGTTGTCACAATGGCTGATGCTGAAGGGCTAGATGCACATAAACGTGCCGTGACTATTCGAATTGAAAAATT AGCTAAATTGAATTAA
Upstream 100 bases:
>100_bases GTACTGAAAATCTATTCTGGGAAACGATGGAACAACTAAAAGCATTGGGTGCGAGCTCTATTCTTGTTCTTCCAATTGAG AAGATGATGGAGTAACCATT
Downstream 100 bases:
>100_bases TAGAGACCATAGATATGGAAAAATTAGCTCGTAAACAAGTTCAAGCCTTGACGCCGTATCTATCGGCTCGTCGTATTGGT GGCAGTGGTGATGTTTGGCT
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKTLVWQSLSNSQQDTVLQRPAITEGANITAAVTSVINTVKQDGDAGVLALTEKFDKVKPESIRVSKSEIDAASERLSEK MKAALQQAYSNISKFHKAQKPQPIKVETQPGVVCEQITMPVNKVGLYIPGGSAPLPSTVLMLGIPAQIAGCHKVVLCSPP PIADEILYVAKLCKVDEVYNIGGAQAIAAMAYGTESVSKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADPDFIAADLLSQAEHGPDSQVILVTPSPIIADQVADAIEKQLKELTRADIARQALGSSLLIIAKSLTQCVSISNFY GPEHLIVQTKNPRELLPLLDNAGSIFLGEYSPESAGDYASGTNHVLPTYGYTRTHSSLGLADFSKRMTVQELTADGLKGL APTVVTMADAEGLDAHKRAVTIRIEKLAKLN
Sequences:
>Translated_431_residues MKTLVWQSLSNSQQDTVLQRPAITEGANITAAVTSVINTVKQDGDAGVLALTEKFDKVKPESIRVSKSEIDAASERLSEK MKAALQQAYSNISKFHKAQKPQPIKVETQPGVVCEQITMPVNKVGLYIPGGSAPLPSTVLMLGIPAQIAGCHKVVLCSPP PIADEILYVAKLCKVDEVYNIGGAQAIAAMAYGTESVSKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADPDFIAADLLSQAEHGPDSQVILVTPSPIIADQVADAIEKQLKELTRADIARQALGSSLLIIAKSLTQCVSISNFY GPEHLIVQTKNPRELLPLLDNAGSIFLGEYSPESAGDYASGTNHVLPTYGYTRTHSSLGLADFSKRMTVQELTADGLKGL APTVVTMADAEGLDAHKRAVTIRIEKLAKLN >Mature_431_residues MKTLVWQSLSNSQQDTVLQRPAITEGANITAAVTSVINTVKQDGDAGVLALTEKFDKVKPESIRVSKSEIDAASERLSEK MKAALQQAYSNISKFHKAQKPQPIKVETQPGVVCEQITMPVNKVGLYIPGGSAPLPSTVLMLGIPAQIAGCHKVVLCSPP PIADEILYVAKLCKVDEVYNIGGAQAIAAMAYGTESVSKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA DETADPDFIAADLLSQAEHGPDSQVILVTPSPIIADQVADAIEKQLKELTRADIARQALGSSLLIIAKSLTQCVSISNFY GPEHLIVQTKNPRELLPLLDNAGSIFLGEYSPESAGDYASGTNHVLPTYGYTRTHSSLGLADFSKRMTVQELTADGLKGL APTVVTMADAEGLDAHKRAVTIRIEKLAKLN
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=422, Percent_Identity=65.6398104265403, Blast_Score=569, Evalue=1e-163, Organism=Saccharomyces cerevisiae, GI6319819, Length=420, Percent_Identity=49.2857142857143, Blast_Score=398, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 45898; Mature: 45898
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLVWQSLSNSQQDTVLQRPAITEGANITAAVTSVINTVKQDGDAGVLALTEKFDKVKP CCCEEHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCC ESIRVSKSEIDAASERLSEKMKAALQQAYSNISKFHKAQKPQPIKVETQPGVVCEQITMP CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCC VNKVGLYIPGGSAPLPSTVLMLGIPAQIAGCHKVVLCSPPPIADEILYVAKLCKVDEVYN HHHEEEEECCCCCCCCCEEEEEECCHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHC IGGAQAIAAMAYGTESVSKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA CCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE DETADPDFIAADLLSQAEHGPDSQVILVTPSPIIADQVADAIEKQLKELTRADIARQALG CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSLLIIAKSLTQCVSISNFYGPEHLIVQTKNPRELLPLLDNAGSIFLGEYSPESAGDYAS CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCEEEECCCCCCCCCCCC GTNHVLPTYGYTRTHSSLGLADFSKRMTVQELTADGLKGLAPTVVTMADAEGLDAHKRAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHEE TIRIEKLAKLN EEEEHHHHCCC >Mature Secondary Structure MKTLVWQSLSNSQQDTVLQRPAITEGANITAAVTSVINTVKQDGDAGVLALTEKFDKVKP CCCEEHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCC ESIRVSKSEIDAASERLSEKMKAALQQAYSNISKFHKAQKPQPIKVETQPGVVCEQITMP CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCC VNKVGLYIPGGSAPLPSTVLMLGIPAQIAGCHKVVLCSPPPIADEILYVAKLCKVDEVYN HHHEEEEECCCCCCCCCEEEEEECCHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHC IGGAQAIAAMAYGTESVSKVDKIFGPGNAYVTEAKRQVSNDFRGAAIDMPAGPSEVLVIA CCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE DETADPDFIAADLLSQAEHGPDSQVILVTPSPIIADQVADAIEKQLKELTRADIARQALG CCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SSLLIIAKSLTQCVSISNFYGPEHLIVQTKNPRELLPLLDNAGSIFLGEYSPESAGDYAS CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCEEEECCCCCCCCCCCC GTNHVLPTYGYTRTHSSLGLADFSKRMTVQELTADGLKGLAPTVVTMADAEGLDAHKRAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHEE TIRIEKLAKLN EEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA