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The map label for this gene is vasQ

Identifier: 209694675

GI number: 209694675

Start: 1226252

End: 1226746

Strand: Reverse

Name: vasQ

Synonym: VSAL_I1124

Alternate gene names: NA

Gene position: 1226746-1226252 (Counterclockwise)

Preceding gene: 209694676

Following gene: 209694674

Centisome position: 36.89

GC content: 37.78

Gene sequence:

>495_bases
ATGTCAAAAGACGGATCTGTAGCGCCAAAAGAGCGCATAAATGTGACATTTAAACCATCGTCAGGTGATGCGGCGGAGGC
ACTTGAACTTCCTTTAAAAATGATGGTACTAGGTGATTTTACACTGCAGCAAGATGATCGAAAATTGGAAGATCGTAAGC
CTCTCAACATTGATAAAAGTAACTTCAATGATGTGATAGAAAAACAAGATTTAAATATTGAATTTGGTGTAAAAAATCGC
CTTCAAGATGATGAAAATGAAGAGATCCCAGTAAACCTTTCATTCAAGAACATGACTGATTTTGACCCTAGCAGTATCGT
AGAGCAAGTCCCTGAGCTAAAGGGATTAATGGATTTACGCGAGGCACTTGTTTCCCTAAAAGGTCCATTAGGTAATGTTC
CTGCATTTAGAAAAGCAATTGAAGATGCATTAGTCAATGACGAAGCTCGTGAAAAGCTATTAAGTGAATTAGGTTTAGTG
ACGGAAAAGGAATAA

Upstream 100 bases:

>100_bases
CCAATAAAGAACAAGACACTCATTTAATGAATACATTACGAGAAAGACTCTGTTGCTTAAATCCAATGCGAGTTCTTAAT
TTTTAAACTTAGGAGACATC

Downstream 100 bases:

>100_bases
CCAATGTCTGAAACAAGCACAGCCCAAGAAATACAAAAAGAAACAACGATAGGTCTCCTTGATCAAATCGTTGCTCAAAC
TAATTTAACACCAGAGGATG

Product: type VI secretion protein VasQ

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpB; Cytoplasmic Protein; Type VI Secretion Protein VasQ; Intracellular Growth Locus Subunit A; Type VI Secretion; Conserved Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSKDGSVAPKERINVTFKPSSGDAAEALELPLKMMVLGDFTLQQDDRKLEDRKPLNIDKSNFNDVIEKQDLNIEFGVKNR
LQDDENEEIPVNLSFKNMTDFDPSSIVEQVPELKGLMDLREALVSLKGPLGNVPAFRKAIEDALVNDEAREKLLSELGLV
TEKE

Sequences:

>Translated_164_residues
MSKDGSVAPKERINVTFKPSSGDAAEALELPLKMMVLGDFTLQQDDRKLEDRKPLNIDKSNFNDVIEKQDLNIEFGVKNR
LQDDENEEIPVNLSFKNMTDFDPSSIVEQVPELKGLMDLREALVSLKGPLGNVPAFRKAIEDALVNDEAREKLLSELGLV
TEKE
>Mature_163_residues
SKDGSVAPKERINVTFKPSSGDAAEALELPLKMMVLGDFTLQQDDRKLEDRKPLNIDKSNFNDVIEKQDLNIEFGVKNRL
QDDENEEIPVNLSFKNMTDFDPSSIVEQVPELKGLMDLREALVSLKGPLGNVPAFRKAIEDALVNDEAREKLLSELGLVT
EKE

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18385; Mature: 18254

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDGSVAPKERINVTFKPSSGDAAEALELPLKMMVLGDFTLQQDDRKLEDRKPLNIDKS
CCCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCC
NFNDVIEKQDLNIEFGVKNRLQDDENEEIPVNLSFKNMTDFDPSSIVEQVPELKGLMDLR
CHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
EALVSLKGPLGNVPAFRKAIEDALVNDEAREKLLSELGLVTEKE
HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SKDGSVAPKERINVTFKPSSGDAAEALELPLKMMVLGDFTLQQDDRKLEDRKPLNIDKS
CCCCCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCC
NFNDVIEKQDLNIEFGVKNRLQDDENEEIPVNLSFKNMTDFDPSSIVEQVPELKGLMDLR
CHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
EALVSLKGPLGNVPAFRKAIEDALVNDEAREKLLSELGLVTEKE
HHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA