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The map label for this gene is vasR

Identifier: 209694674

GI number: 209694674

Start: 1224773

End: 1226248

Strand: Reverse

Name: vasR

Synonym: VSAL_I1123

Alternate gene names: NA

Gene position: 1226248-1224773 (Counterclockwise)

Preceding gene: 209694675

Following gene: 209694673

Centisome position: 36.88

GC content: 39.3

Gene sequence:

>1476_bases
ATGTCTGAAACAAGCACAGCCCAAGAAATACAAAAAGAAACAACGATAGGTCTCCTTGATCAAATCGTTGCTCAAACTAA
TTTAACACCAGAGGATGAAACCTATGGTATTGCTAAACGTGGCGTCAGCGCATTTATTCAAGAGCTATTGAAACCTCATA
ATCAATCTGAGCCGGTTAAAAAAGCATTAATCGACAAAATGATCACAGAAATTGATCAGCGCTTGAGTACTCAAGTTGAT
GAAATATTACATCACTCTTCATTTCAGCAGCTTGAGTCTGCTTGGAGAGGACTCAAGTTATTAGTAGATCGCACCGATTT
TCGAGAGAACACAAAAATTGAAATCATCAACATCTCTAAAAAGGATCTACTCGAAGATTTTGAAGATGCTTCTGACATCA
CTCAATCCGGTTTATACAAACATGTCTATACGAATGAATTTGGTACATTTGGTGGTCAACCTGTCGGTGCTATTATTGGT
AATTATGATTTTGGCCCTTCTGCACCCGATATTAAAAATCTACAAAATGTGGCGGCTGTAGCCGCAATGGCTCATGCCCC
TTTTATTTCAGCGGCGGGTCCTAAATTTTTTGGATTAGATTCTTTTGAAGGGTTGCCTGATCTCAAAGATCTTAATGATC
ATTTCGAAAGCCCACAATATGCAAAATGGCAGAGTTTTAGAGATCAAGAAGACGCCCGTTACGTTGGGTTAACCTTACCA
CGCTTTTTACTTCGTCAACCTTATGACCCTGAAGAAAACCCAGTAAAAACATTTAACTACCATGAGAATGTATCTGCAAC
TCATGAAGATTACCTATGGGGTAATACCGCGTTTACTATGGCCTCTCGAGTCACTGAAAGCTTTGCTAATTTCCGTTGGT
GTCCAAATATTATCGGCCCTCAATCTGGTGGTACTGTTGAAGACCTTCCATTGCATCATTTTGACAGCATGGGAGATATC
GAAACAAAAATACCCACTGAAGTTTTAGTGTCTGATCGCCGTGAATTCGAACTAGCAGAAGAAGGATTTATCGCCTTAAC
CATGCGTAAAGGTTCAGATAATGCGGCTTTTTTCTCTGCTAATTCGGTTCAAAAAGCCAAATTATTTGGTAATTCTGAAG
AAGGAAAAAGTGCAGAACTAAATTACAGGTTGGGAACTCAACTCCCTTACTTATTTATTATTAGCCGCTTAGCACATTAC
ATAAAAGTACTACAACGAGAACAAATTGGCAGCTGGAAAGAGCCTACCGATCTTGAAAGAGAATTGAATACGTGGATAAG
ACAATACATTACTGATCAAGAAAATCCACCAGCAGAAGTGAGAAGCCGTCGTCCATTACGCGCCGCAAGCATTGAAGTTA
TCGATGTTGAAGGAAGCCCTGGTTGGTACAAAGTAAATTTATCCGTTCGCCCTCATTTTAAATATATGGGTTCTGATTTT
ACTTTGTCACTCGTTGGTAAGTTAGATCAAGAATAA

Upstream 100 bases:

>100_bases
TCCTGCATTTAGAAAAGCAATTGAAGATGCATTAGTCAATGACGAAGCTCGTGAAAAGCTATTAAGTGAATTAGGTTTAG
TGACGGAAAAGGAATAACCA

Downstream 100 bases:

>100_bases
CAAAATCGTGCCTTGTGCTTATTAATGACAATAAACACAAGGCAATAGTGGCGTGGCATCATTCATTTAAGGAAGAAAGG
AAAAGTAATGCTTAAACAAC

Product: type VI secretion protein VasR

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSETSTAQEIQKETTIGLLDQIVAQTNLTPEDETYGIAKRGVSAFIQELLKPHNQSEPVKKALIDKMITEIDQRLSTQVD
EILHHSSFQQLESAWRGLKLLVDRTDFRENTKIEIINISKKDLLEDFEDASDITQSGLYKHVYTNEFGTFGGQPVGAIIG
NYDFGPSAPDIKNLQNVAAVAAMAHAPFISAAGPKFFGLDSFEGLPDLKDLNDHFESPQYAKWQSFRDQEDARYVGLTLP
RFLLRQPYDPEENPVKTFNYHENVSATHEDYLWGNTAFTMASRVTESFANFRWCPNIIGPQSGGTVEDLPLHHFDSMGDI
ETKIPTEVLVSDRREFELAEEGFIALTMRKGSDNAAFFSANSVQKAKLFGNSEEGKSAELNYRLGTQLPYLFIISRLAHY
IKVLQREQIGSWKEPTDLERELNTWIRQYITDQENPPAEVRSRRPLRAASIEVIDVEGSPGWYKVNLSVRPHFKYMGSDF
TLSLVGKLDQE

Sequences:

>Translated_491_residues
MSETSTAQEIQKETTIGLLDQIVAQTNLTPEDETYGIAKRGVSAFIQELLKPHNQSEPVKKALIDKMITEIDQRLSTQVD
EILHHSSFQQLESAWRGLKLLVDRTDFRENTKIEIINISKKDLLEDFEDASDITQSGLYKHVYTNEFGTFGGQPVGAIIG
NYDFGPSAPDIKNLQNVAAVAAMAHAPFISAAGPKFFGLDSFEGLPDLKDLNDHFESPQYAKWQSFRDQEDARYVGLTLP
RFLLRQPYDPEENPVKTFNYHENVSATHEDYLWGNTAFTMASRVTESFANFRWCPNIIGPQSGGTVEDLPLHHFDSMGDI
ETKIPTEVLVSDRREFELAEEGFIALTMRKGSDNAAFFSANSVQKAKLFGNSEEGKSAELNYRLGTQLPYLFIISRLAHY
IKVLQREQIGSWKEPTDLERELNTWIRQYITDQENPPAEVRSRRPLRAASIEVIDVEGSPGWYKVNLSVRPHFKYMGSDF
TLSLVGKLDQE
>Mature_490_residues
SETSTAQEIQKETTIGLLDQIVAQTNLTPEDETYGIAKRGVSAFIQELLKPHNQSEPVKKALIDKMITEIDQRLSTQVDE
ILHHSSFQQLESAWRGLKLLVDRTDFRENTKIEIINISKKDLLEDFEDASDITQSGLYKHVYTNEFGTFGGQPVGAIIGN
YDFGPSAPDIKNLQNVAAVAAMAHAPFISAAGPKFFGLDSFEGLPDLKDLNDHFESPQYAKWQSFRDQEDARYVGLTLPR
FLLRQPYDPEENPVKTFNYHENVSATHEDYLWGNTAFTMASRVTESFANFRWCPNIIGPQSGGTVEDLPLHHFDSMGDIE
TKIPTEVLVSDRREFELAEEGFIALTMRKGSDNAAFFSANSVQKAKLFGNSEEGKSAELNYRLGTQLPYLFIISRLAHYI
KVLQREQIGSWKEPTDLERELNTWIRQYITDQENPPAEVRSRRPLRAASIEVIDVEGSPGWYKVNLSVRPHFKYMGSDFT
LSLVGKLDQE

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55598; Mature: 55467

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETSTAQEIQKETTIGLLDQIVAQTNLTPEDETYGIAKRGVSAFIQELLKPHNQSEPVK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KALIDKMITEIDQRLSTQVDEILHHSSFQQLESAWRGLKLLVDRTDFRENTKIEIINISK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHCCCCCCCCCEEEEEECCH
KDLLEDFEDASDITQSGLYKHVYTNEFGTFGGQPVGAIIGNYDFGPSAPDIKNLQNVAAV
HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHH
AAMAHAPFISAAGPKFFGLDSFEGLPDLKDLNDHFESPQYAKWQSFRDQEDARYVGLTLP
HHHHHCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCEEECCHHH
RFLLRQPYDPEENPVKTFNYHENVSATHEDYLWGNTAFTMASRVTESFANFRWCPNIIGP
HHHHCCCCCCCCCCCCEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
QSGGTVEDLPLHHFDSMGDIETKIPTEVLVSDRREFELAEEGFIALTMRKGSDNAAFFSA
CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCHHHHHHCCCEEEEEEECCCCCCEEEEC
NSVQKAKLFGNSEEGKSAELNYRLGTQLPYLFIISRLAHYIKVLQREQIGSWKEPTDLER
CCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ELNTWIRQYITDQENPPAEVRSRRPLRAASIEVIDVEGSPGWYKVNLSVRPHFKYMGSDF
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCHHCCCCCE
TLSLVGKLDQE
EEEECCCCCCC
>Mature Secondary Structure 
SETSTAQEIQKETTIGLLDQIVAQTNLTPEDETYGIAKRGVSAFIQELLKPHNQSEPVK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KALIDKMITEIDQRLSTQVDEILHHSSFQQLESAWRGLKLLVDRTDFRENTKIEIINISK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHCCCCCCCCCEEEEEECCH
KDLLEDFEDASDITQSGLYKHVYTNEFGTFGGQPVGAIIGNYDFGPSAPDIKNLQNVAAV
HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHH
AAMAHAPFISAAGPKFFGLDSFEGLPDLKDLNDHFESPQYAKWQSFRDQEDARYVGLTLP
HHHHHCCCCCCCCCCEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCEEECCHHH
RFLLRQPYDPEENPVKTFNYHENVSATHEDYLWGNTAFTMASRVTESFANFRWCPNIIGP
HHHHCCCCCCCCCCCCEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
QSGGTVEDLPLHHFDSMGDIETKIPTEVLVSDRREFELAEEGFIALTMRKGSDNAAFFSA
CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCHHHHHHCCCEEEEEEECCCCCCEEEEC
NSVQKAKLFGNSEEGKSAELNYRLGTQLPYLFIISRLAHYIKVLQREQIGSWKEPTDLER
CCCHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
ELNTWIRQYITDQENPPAEVRSRRPLRAASIEVIDVEGSPGWYKVNLSVRPHFKYMGSDF
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCEEEEEEEECCCHHCCCCCE
TLSLVGKLDQE
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA