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The map label for this gene is vasC

Identifier: 209694669

GI number: 209694669

Start: 1215928

End: 1217289

Strand: Reverse

Name: vasC

Synonym: VSAL_I1117

Alternate gene names: NA

Gene position: 1217289-1215928 (Counterclockwise)

Preceding gene: 209694670

Following gene: 209694668

Centisome position: 36.61

GC content: 39.13

Gene sequence:

>1362_bases
ATGATGATTACCGACCTGTTGGCAATCCGGCACCACAAGAACAAACAACTCTCGTTTCAGAGGAGAAATAAAATGGAACT
CGCCTTTGATATTATTCAATCACAAGATTTACCTATCGATACCCTACCTACTTTTACCTTTAAAAAGGCAGGAGGCACCA
TTGGCCGTAGTCCCAATTCAGATTGGTATATCGCAGACAATAAACGCCAACTGTCGAATGTTCACGTATCCATAAGTTAT
GAAAATGATCAATTTTTCATTTCAGACAGCAGCACAAACGGAACTTATCTTGATGGGCAAGAGGCTTCACTAAACAACGG
GGAATTGCACCCTGTTTCTCATGGTGATATTTACGAATTAGGTTTAATAAAAATTCGAGCTCGCTTGCTACAAGACCCAG
AAAATTATATTTCACCAAGCCAAAACACGCTTGATTCTTCCTCAAATGATGAGCAATCTGTCTTTAATATGATCCCTGAC
GACAGTTTTTTAAGCAATGCGCCTATCGAAGAATTACTTAACACCGATGAAGACATTATTTTAAAACAAATCGAAGATGC
GGTACCCGCTCAATCTCAAATGGACGATACCTTACTTAAAGAACAATTCATTTCTCCCGTTTTATATGATGACTTTGATG
AAGAAAATGATGCGGCCTCTTATACCGGAGAAGAACAGATAATAGAAGACCCCATTTTTTCTACTCAAACTAGATCTACG
GATAACCCAATACCAGAATCTAAAGAAAAAACGATAGAAAAAGAGAATACTGCCGAACAATCTCAAGCCTATTTAGCCGC
GTTATCAAAAGGCCTAGGGATTGAATTAACCAATCTAGAAGATCCAGAGCAAACATTATTTGATGTTGGTAGCGCATTAA
GAAGTTCGATCAATGGCATTCAACAGCTTTTACGAACCCGAACTGAAATTAAAAATAAACTCACCGCGAATGCCACCACC
ATTCAGGCTCAGGGAAATAACCCAATTAAGTTCAGCCATGATGTCAATGATGCCCTTAATGTCATTATTCACCATAAACC
CGGCTATTTACAGGGGATTGAAGCCATAAACCAAAGCTGTAAAGACATACAAGCCAACCAACTCGCCATTCATGATGCTT
GCCAACATACCTTGGATGCACTCATAGAAAAGCTATCACCACAGACATTAACATATCGGTTTGTACAGGATGGTATTCAA
ACAAAATTCACAAAACCAGACGCATTGTACTGGCAAGCCTATAAGAAACTGCATGAGCAAATAAGTCATGATTCTGATTG
GAGAAATGCCTTACTAGAGCAAGACTTTGCGAAACAATACGAATCTCAACTGCAAATGTTATCTGCCGCTTTACGCGTGT
AA

Upstream 100 bases:

>100_bases
ACGCAAATTTAATTTATCTGCCAAGGAATGGAGATTCTAAGCATGTTATTACGTTTATCATTATTCACCACGATTTTAAT
GCTTAGTGCATGCAGTAACT

Downstream 100 bases:

>100_bases
AACACAACTAATGATAATTAAAGGAATACATTCATGAAATCGTTGTTCGCTTTATTGACGATATTAATGTTCAGTGGCTG
TAGCAATACCCCTGAACCAA

Product: type VI secretion protein VasC

Products: NA

Alternate protein names: Type VI Secretion System FHA Domain Protein; FHA Domain Containing Protein; Type VI Secretion Protein VasC; Regulatory Protein; Forkhead-Associated Protein Type VI Secretion System; Protein ImpI/VasC; Secreted Protein; FHA Domain Protein

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MMITDLLAIRHHKNKQLSFQRRNKMELAFDIIQSQDLPIDTLPTFTFKKAGGTIGRSPNSDWYIADNKRQLSNVHVSISY
ENDQFFISDSSTNGTYLDGQEASLNNGELHPVSHGDIYELGLIKIRARLLQDPENYISPSQNTLDSSSNDEQSVFNMIPD
DSFLSNAPIEELLNTDEDIILKQIEDAVPAQSQMDDTLLKEQFISPVLYDDFDEENDAASYTGEEQIIEDPIFSTQTRST
DNPIPESKEKTIEKENTAEQSQAYLAALSKGLGIELTNLEDPEQTLFDVGSALRSSINGIQQLLRTRTEIKNKLTANATT
IQAQGNNPIKFSHDVNDALNVIIHHKPGYLQGIEAINQSCKDIQANQLAIHDACQHTLDALIEKLSPQTLTYRFVQDGIQ
TKFTKPDALYWQAYKKLHEQISHDSDWRNALLEQDFAKQYESQLQMLSAALRV

Sequences:

>Translated_453_residues
MMITDLLAIRHHKNKQLSFQRRNKMELAFDIIQSQDLPIDTLPTFTFKKAGGTIGRSPNSDWYIADNKRQLSNVHVSISY
ENDQFFISDSSTNGTYLDGQEASLNNGELHPVSHGDIYELGLIKIRARLLQDPENYISPSQNTLDSSSNDEQSVFNMIPD
DSFLSNAPIEELLNTDEDIILKQIEDAVPAQSQMDDTLLKEQFISPVLYDDFDEENDAASYTGEEQIIEDPIFSTQTRST
DNPIPESKEKTIEKENTAEQSQAYLAALSKGLGIELTNLEDPEQTLFDVGSALRSSINGIQQLLRTRTEIKNKLTANATT
IQAQGNNPIKFSHDVNDALNVIIHHKPGYLQGIEAINQSCKDIQANQLAIHDACQHTLDALIEKLSPQTLTYRFVQDGIQ
TKFTKPDALYWQAYKKLHEQISHDSDWRNALLEQDFAKQYESQLQMLSAALRV
>Mature_453_residues
MMITDLLAIRHHKNKQLSFQRRNKMELAFDIIQSQDLPIDTLPTFTFKKAGGTIGRSPNSDWYIADNKRQLSNVHVSISY
ENDQFFISDSSTNGTYLDGQEASLNNGELHPVSHGDIYELGLIKIRARLLQDPENYISPSQNTLDSSSNDEQSVFNMIPD
DSFLSNAPIEELLNTDEDIILKQIEDAVPAQSQMDDTLLKEQFISPVLYDDFDEENDAASYTGEEQIIEDPIFSTQTRST
DNPIPESKEKTIEKENTAEQSQAYLAALSKGLGIELTNLEDPEQTLFDVGSALRSSINGIQQLLRTRTEIKNKLTANATT
IQAQGNNPIKFSHDVNDALNVIIHHKPGYLQGIEAINQSCKDIQANQLAIHDACQHTLDALIEKLSPQTLTYRFVQDGIQ
TKFTKPDALYWQAYKKLHEQISHDSDWRNALLEQDFAKQYESQLQMLSAALRV

Specific function: Unknown

COG id: COG3456

COG function: function code T; Uncharacterized conserved protein, contains FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51151; Mature: 51151

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMITDLLAIRHHKNKQLSFQRRNKMELAFDIIQSQDLPIDTLPTFTFKKAGGTIGRSPNS
CCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCC
DWYIADNKRQLSNVHVSISYENDQFFISDSSTNGTYLDGQEASLNNGELHPVSHGDIYEL
CEEEECCCEEECEEEEEEEECCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCHHH
GLIKIRARLLQDPENYISPSQNTLDSSSNDEQSVFNMIPDDSFLSNAPIEELLNTDEDII
HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHCCCHHHH
LKQIEDAVPAQSQMDDTLLKEQFISPVLYDDFDEENDAASYTGEEQIIEDPIFSTQTRST
HHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
DNPIPESKEKTIEKENTAEQSQAYLAALSKGLGIELTNLEDPEQTLFDVGSALRSSINGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
QQLLRTRTEIKNKLTANATTIQAQGNNPIKFSHDVNDALNVIIHHKPGYLQGIEAINQSC
HHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCHHEEEEECCCCHHHHHHHHHHHH
KDIQANQLAIHDACQHTLDALIEKLSPQTLTYRFVQDGIQTKFTKPDALYWQAYKKLHEQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ISHDSDWRNALLEQDFAKQYESQLQMLSAALRV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMITDLLAIRHHKNKQLSFQRRNKMELAFDIIQSQDLPIDTLPTFTFKKAGGTIGRSPNS
CCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCC
DWYIADNKRQLSNVHVSISYENDQFFISDSSTNGTYLDGQEASLNNGELHPVSHGDIYEL
CEEEECCCEEECEEEEEEEECCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCHHH
GLIKIRARLLQDPENYISPSQNTLDSSSNDEQSVFNMIPDDSFLSNAPIEELLNTDEDII
HHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHCCCHHHH
LKQIEDAVPAQSQMDDTLLKEQFISPVLYDDFDEENDAASYTGEEQIIEDPIFSTQTRST
HHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC
DNPIPESKEKTIEKENTAEQSQAYLAALSKGLGIELTNLEDPEQTLFDVGSALRSSINGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH
QQLLRTRTEIKNKLTANATTIQAQGNNPIKFSHDVNDALNVIIHHKPGYLQGIEAINQSC
HHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCHHEEEEECCCCHHHHHHHHHHHH
KDIQANQLAIHDACQHTLDALIEKLSPQTLTYRFVQDGIQTKFTKPDALYWQAYKKLHEQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ISHDSDWRNALLEQDFAKQYESQLQMLSAALRV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA