Click here to switch to the map view.

The map label for this gene is vasE

Identifier: 209694667

GI number: 209694667

Start: 1214072

End: 1215394

Strand: Reverse

Name: vasE

Synonym: VSAL_I1115

Alternate gene names: NA

Gene position: 1215394-1214072 (Counterclockwise)

Preceding gene: 209694668

Following gene: 209694666

Centisome position: 36.55

GC content: 38.78

Gene sequence:

>1323_bases
ATGCAAAAAGTAATATGGAATGAAGGCATGCTATTACGCCCTCAACATTTCCAGCAAAATGATCGTTATTATAATCATCA
ATTACAAACGAGAACCCAACAGCAACACCGCTTCAATTGGGGATTTCATTCTTTAAGTTTTGATAATCACCACCTATCTG
TGGGAAAAATCGTGATAAATCAAGCCAGTGGTATTTTACCTGATGGTTCATTATTTGATATCCAGCACCAAGCAACGCCG
ATTATTTGGGAATCTGACGAACCAAAAACAAACCTCACATTATATTTGGCTTTATCTTTATCCACCGTGAATAGTCCGGA
AGCTCGTAGTGACAAAGAAGCAGGCATTAACACTCGCTATCTTTCTTATGATCTCACTATTGCAGATAACAACGCTCAAA
TACAAAACTTACAAACAATCTCTTGTGGTGAATTAGATTTTCATATCATTACAGAAGAAGAACTAGATAATCACTGGGTA
AAATTGAAACTCTGTGAAATAAAACAAGTCACTCCTGAAGGCGCAATACAGTTAAACCAAAACTTTGAAGCGAGTTTCAT
TAATGGTCAGCACTCTTCCTTGGTTCATCGCTCTTTGCGAGAAGTATTAACGTTAGTCACTCATAAAGCTGACATTCTTG
CAGAACGAATTACTCAATCAGGCCATGCGACATCAGAGATCGGGGATTTTTTATTACTTCAATTACTGAATAAATACGAA
CCTCAATTGCACTACTTAAACCAATGCAATCAATATCATCCAGAAGAGTTGTACTTATTACTTGCCACACTACAAGGCGA
ATTAGCAACCTATGATTCAGCTCAACGTCGTGCAGAGTTAAGTCTTGCTTATAACCATAAAGAACAAGGGGATTCCTTCG
AACGCCTTCTTTTCCGTCTTCGTAAACAATTAAACCAATCACTCAAACAAAATGCCTTTGAGATCCCACTTCAAAAACGT
AATCACGGCGTTCTCATTGCTCCGATTTCAGATACGAGCTTGTTACAAGAAGCCTCCTTTATTCTTGCCGCCCGTTCTCA
TACGGATGCAGAAACGTTACGTAAGCAGCTTCCTCCACAGTTAAAAGTAGGCCCTGTTGAGAAAATTCGAAACTTAGTCA
ACTTACAATTACCAGGAATAACTTGCCGATCGTTATCGGTCGCACCACGACAAGTCCCTTTCCATGGCGATTATTGTTAT
TTTACTCTTGATTTGAATGCGAATGACCGATCTCAATTAACTCAATCAGGAGGTTTTGCGTTCCATATCGCTGGAGATTT
TCCAGAACTGTCCCTCTTTTTTTGGGCTATAAGGAATAAATAA

Upstream 100 bases:

>100_bases
TAGAATTGATAGCGACGGATACCTCTATTGTAAAGCTGGAGCGCGTAAAGAAAAAAAACACAACCCCAGCTAATAACTCC
CACATTTAGAGGACATCGCT

Downstream 100 bases:

>100_bases
TATGAGCAGCATGGATGACCGCACGGTACTTATTACCCAAGATCCAAATCAAGTTAGCCCTACGTTAACTCAGAGCCCCA
ATGCCCCAAAGTTTGATCAA

Product: type VI secretion protein VasE

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MQKVIWNEGMLLRPQHFQQNDRYYNHQLQTRTQQQHRFNWGFHSLSFDNHHLSVGKIVINQASGILPDGSLFDIQHQATP
IIWESDEPKTNLTLYLALSLSTVNSPEARSDKEAGINTRYLSYDLTIADNNAQIQNLQTISCGELDFHIITEEELDNHWV
KLKLCEIKQVTPEGAIQLNQNFEASFINGQHSSLVHRSLREVLTLVTHKADILAERITQSGHATSEIGDFLLLQLLNKYE
PQLHYLNQCNQYHPEELYLLLATLQGELATYDSAQRRAELSLAYNHKEQGDSFERLLFRLRKQLNQSLKQNAFEIPLQKR
NHGVLIAPISDTSLLQEASFILAARSHTDAETLRKQLPPQLKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCY
FTLDLNANDRSQLTQSGGFAFHIAGDFPELSLFFWAIRNK

Sequences:

>Translated_440_residues
MQKVIWNEGMLLRPQHFQQNDRYYNHQLQTRTQQQHRFNWGFHSLSFDNHHLSVGKIVINQASGILPDGSLFDIQHQATP
IIWESDEPKTNLTLYLALSLSTVNSPEARSDKEAGINTRYLSYDLTIADNNAQIQNLQTISCGELDFHIITEEELDNHWV
KLKLCEIKQVTPEGAIQLNQNFEASFINGQHSSLVHRSLREVLTLVTHKADILAERITQSGHATSEIGDFLLLQLLNKYE
PQLHYLNQCNQYHPEELYLLLATLQGELATYDSAQRRAELSLAYNHKEQGDSFERLLFRLRKQLNQSLKQNAFEIPLQKR
NHGVLIAPISDTSLLQEASFILAARSHTDAETLRKQLPPQLKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCY
FTLDLNANDRSQLTQSGGFAFHIAGDFPELSLFFWAIRNK
>Mature_440_residues
MQKVIWNEGMLLRPQHFQQNDRYYNHQLQTRTQQQHRFNWGFHSLSFDNHHLSVGKIVINQASGILPDGSLFDIQHQATP
IIWESDEPKTNLTLYLALSLSTVNSPEARSDKEAGINTRYLSYDLTIADNNAQIQNLQTISCGELDFHIITEEELDNHWV
KLKLCEIKQVTPEGAIQLNQNFEASFINGQHSSLVHRSLREVLTLVTHKADILAERITQSGHATSEIGDFLLLQLLNKYE
PQLHYLNQCNQYHPEELYLLLATLQGELATYDSAQRRAELSLAYNHKEQGDSFERLLFRLRKQLNQSLKQNAFEIPLQKR
NHGVLIAPISDTSLLQEASFILAARSHTDAETLRKQLPPQLKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCY
FTLDLNANDRSQLTQSGGFAFHIAGDFPELSLFFWAIRNK

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50368; Mature: 50368

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVIWNEGMLLRPQHFQQNDRYYNHQLQTRTQQQHRFNWGFHSLSFDNHHLSVGKIVIN
CCCEEECCCEEECCHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEE
QASGILPDGSLFDIQHQATPIIWESDEPKTNLTLYLALSLSTVNSPEARSDKEAGINTRY
CCCCCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEEEEEEECCCCCCCCCHHCCCCEEE
LSYDLTIADNNAQIQNLQTISCGELDFHIITEEELDNHWVKLKLCEIKQVTPEGAIQLNQ
EEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCEEECC
NFEASFINGQHSSLVHRSLREVLTLVTHKADILAERITQSGHATSEIGDFLLLQLLNKYE
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PQLHYLNQCNQYHPEELYLLLATLQGELATYDSAQRRAELSLAYNHKEQGDSFERLLFRL
HHHHHHHHCCCCCCHHHEEEEEHHCCCHHHCCCHHHHEEEEEEECCCCCCCHHHHHHHHH
RKQLNQSLKQNAFEIPLQKRNHGVLIAPISDTSLLQEASFILAARSHTDAETLRKQLPPQ
HHHHHHHHHCCCEECCCEECCCCEEEEECCCHHHHHHHHHEEEECCCCCHHHHHHHCCCC
LKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCYFTLDLNANDRSQLTQSGGFA
CCCCHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHCCCEE
FHIAGDFPELSLFFWAIRNK
EEEECCCCCEEEEEEEECCC
>Mature Secondary Structure
MQKVIWNEGMLLRPQHFQQNDRYYNHQLQTRTQQQHRFNWGFHSLSFDNHHLSVGKIVIN
CCCEEECCCEEECCHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEE
QASGILPDGSLFDIQHQATPIIWESDEPKTNLTLYLALSLSTVNSPEARSDKEAGINTRY
CCCCCCCCCCEEEEECCCCCEEECCCCCCCCEEEEEEEEEEECCCCCCCCCHHCCCCEEE
LSYDLTIADNNAQIQNLQTISCGELDFHIITEEELDNHWVKLKLCEIKQVTPEGAIQLNQ
EEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEEEEEEEEECCCCCCEEECC
NFEASFINGQHSSLVHRSLREVLTLVTHKADILAERITQSGHATSEIGDFLLLQLLNKYE
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PQLHYLNQCNQYHPEELYLLLATLQGELATYDSAQRRAELSLAYNHKEQGDSFERLLFRL
HHHHHHHHCCCCCCHHHEEEEEHHCCCHHHCCCHHHHEEEEEEECCCCCCCHHHHHHHHH
RKQLNQSLKQNAFEIPLQKRNHGVLIAPISDTSLLQEASFILAARSHTDAETLRKQLPPQ
HHHHHHHHHCCCEECCCEECCCCEEEEECCCHHHHHHHHHEEEECCCCCHHHHHHHCCCC
LKVGPVEKIRNLVNLQLPGITCRSLSVAPRQVPFHGDYCYFTLDLNANDRSQLTQSGGFA
CCCCHHHHHHHHHEEECCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHCCCEE
FHIAGDFPELSLFFWAIRNK
EEEECCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA