Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is vasL [H]

Identifier: 209694665

GI number: 209694665

Start: 1209043

End: 1209696

Strand: Reverse

Name: vasL [H]

Synonym: VSAL_I1112

Alternate gene names: 209694665

Gene position: 1209696-1209043 (Counterclockwise)

Preceding gene: 209694666

Following gene: 209694663

Centisome position: 36.38

GC content: 39.76

Gene sequence:

>654_bases
ATGGCTTATTTCTCTGCAGAAGGAAAAGTAAGGGACAAAAATGAAGATTCTATTTTGTCTCTTACTGAACAAGGGATTTG
GGTCGTTGCTGATGGAATGGGTGGCTATGAACACGGTGAGATTGCCAGTGGCATGATCACTGATTCATTTAAAACAGAGC
AACTTCATGGGACATTAGAACAGAAAATCACAAAAGCAAAACGAATGCTTTTAAAAGTAAATCATCACCTAAGTCAGGAA
AAAACGCTCTCTCGTAGTCGCATCATTGGCAGTACCGTTTGCATGTTAATCGCTCATCATGGGCACATGGCTTGTCTTTG
GGCTGGTGACTCAAGGTGCTACTTATTTCGACATAAAAGACTGTATCAAATATCAAAAGATCACACTCAAGAACAGAATG
GAAAAGAGGCTCTAACTCAAGCCATTGGAATGGGGAATAACTTGCAAATTGAACACTGTATCATCCCCCTTCAACATCAA
GATACGTTCTTACTCACAAGTGATGGGGTACATAAATACCTATCAAATGCCATGATAGAAGCTTGCATGGCATTACCTAG
TACGCTTAAGGGATGCTATCACCTAAAAGAGCAAGTGTTACTGACTCCTGCAAATGACAATTTATCTGCAATAATGATTA
AGGTGTATCGATGA

Upstream 100 bases:

>100_bases
ACCTTATTTATAGTGACCGAACACCGAACCCATTTAATCGTAAAATTCTGACTAATTTCTATCTTCCAAAAAGGATTAAT
GGATAAGTCAACAATTTCAA

Downstream 100 bases:

>100_bases
ATATAGATCAGTTTATCAATGGGTATGATTCTATCGACAATACAATAGACTCAACGAAAGCTATGTGATATATAGGTTAA
ATTAGTCACGGTTAACGACC

Product: serine/threonine phosphoprotein phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MAYFSAEGKVRDKNEDSILSLTEQGIWVVADGMGGYEHGEIASGMITDSFKTEQLHGTLEQKITKAKRMLLKVNHHLSQE
KTLSRSRIIGSTVCMLIAHHGHMACLWAGDSRCYLFRHKRLYQISKDHTQEQNGKEALTQAIGMGNNLQIEHCIIPLQHQ
DTFLLTSDGVHKYLSNAMIEACMALPSTLKGCYHLKEQVLLTPANDNLSAIMIKVYR

Sequences:

>Translated_217_residues
MAYFSAEGKVRDKNEDSILSLTEQGIWVVADGMGGYEHGEIASGMITDSFKTEQLHGTLEQKITKAKRMLLKVNHHLSQE
KTLSRSRIIGSTVCMLIAHHGHMACLWAGDSRCYLFRHKRLYQISKDHTQEQNGKEALTQAIGMGNNLQIEHCIIPLQHQ
DTFLLTSDGVHKYLSNAMIEACMALPSTLKGCYHLKEQVLLTPANDNLSAIMIKVYR
>Mature_216_residues
AYFSAEGKVRDKNEDSILSLTEQGIWVVADGMGGYEHGEIASGMITDSFKTEQLHGTLEQKITKAKRMLLKVNHHLSQEK
TLSRSRIIGSTVCMLIAHHGHMACLWAGDSRCYLFRHKRLYQISKDHTQEQNGKEALTQAIGMGNNLQIEHCIIPLQHQD
TFLLTSDGVHKYLSNAMIEACMALPSTLKGCYHLKEQVLLTPANDNLSAIMIKVYR

Specific function: Protein phosphatase that dephosphorylates EF-Tu [H]

COG id: COG0631

COG function: function code T; Serine/threonine protein phosphatase

Gene ontology:

Cell location: Cytoplasm. Membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015655
- InterPro:   IPR001932
- InterPro:   IPR014045 [H]

Pfam domain/function: PF00481 PP2C [H]

EC number: =3.1.3.16 [H]

Molecular weight: Translated: 24383; Mature: 24251

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYFSAEGKVRDKNEDSILSLTEQGIWVVADGMGGYEHGEIASGMITDSFKTEQLHGTLE
CCEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCEECCCCCHHHHHHHHH
QKITKAKRMLLKVNHHLSQEKTLSRSRIIGSTVCMLIAHHGHMACLWAGDSRCYLFRHKR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHH
LYQISKDHTQEQNGKEALTQAIGMGNNLQIEHCIIPLQHQDTFLLTSDGVHKYLSNAMIE
HHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHH
ACMALPSTLKGCYHLKEQVLLTPANDNLSAIMIKVYR
HHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEEEEC
>Mature Secondary Structure 
AYFSAEGKVRDKNEDSILSLTEQGIWVVADGMGGYEHGEIASGMITDSFKTEQLHGTLE
CEECCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCEECCCCCHHHHHHHHH
QKITKAKRMLLKVNHHLSQEKTLSRSRIIGSTVCMLIAHHGHMACLWAGDSRCYLFRHKR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEHHH
LYQISKDHTQEQNGKEALTQAIGMGNNLQIEHCIIPLQHQDTFLLTSDGVHKYLSNAMIE
HHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHH
ACMALPSTLKGCYHLKEQVLLTPANDNLSAIMIKVYR
HHHHHHHHHHHHHHHHHCEEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]