Click here to switch to the map view.

The map label for this gene is cvpA [H]

Identifier: 209694638

GI number: 209694638

Start: 1174592

End: 1175083

Strand: Direct

Name: cvpA [H]

Synonym: VSAL_I1079

Alternate gene names: 209694638

Gene position: 1174592-1175083 (Clockwise)

Preceding gene: 209694637

Following gene: 209694639

Centisome position: 35.32

GC content: 40.24

Gene sequence:

>492_bases
ATGATTTGGATCGATTTTGTCATTTTAGGCGTGATTAGCCTATCTGCTTTTATCAGTTTGATTAGAGGTTTTGTAAAAGA
AGCCTTGTCATTGGTTATTTGGTTTGGTGCTTTCTTTGTTGCGAGCAACTTTTATCCAAAACTGGCGGCATATTTTACAA
ATATCCATGATGAAATGGTCAGAAACGGCAGTGCAATAGCTGCCTTATTTGTGGCCACCTTGATTGTCGGTGCTGTGGTT
AACTATGTGGTTGCCCAGTTGGTACAGAAAACAGGGCTGTCTGGAACAGATCGAGTGTTAGGTGTCGTTTTCGGTGGATT
AAGAGGGGTGCTAATTATAGCGGCTGTTCTGTTTTTTATTGATGCCTTTACCTCATTGTCAGATTCGGAGTGGTGGAAGC
AATCTCAATTGATACCGCAATTCTCGGTAGTAATTGAATGGTTCTTTGATTACTTAAAAGATACATCAAGTTTTCTTCCT
GGCGCTAAATAG

Upstream 100 bases:

>100_bases
AATGGTCAATTGCTTAAATTTGCACCACTAAACCCATAAGAAAACGTTTGCGTAGCGGATTTTTCTGTTAAAATGCGCAG
CAAGAGAGAAAATATATATT

Downstream 100 bases:

>100_bases
CGCCAGTTTTTTATCAAATAAAGGACTCTAGGACATGTGCGGTATTGTTGGAATCGTAGGCGCAACACCTGTAAACCAGT
TAATCTATGACGCTTTGACT

Product: colicin V production protein (protein DedE)

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIWIDFVILGVISLSAFISLIRGFVKEALSLVIWFGAFFVASNFYPKLAAYFTNIHDEMVRNGSAIAALFVATLIVGAVV
NYVVAQLVQKTGLSGTDRVLGVVFGGLRGVLIIAAVLFFIDAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLP
GAK

Sequences:

>Translated_163_residues
MIWIDFVILGVISLSAFISLIRGFVKEALSLVIWFGAFFVASNFYPKLAAYFTNIHDEMVRNGSAIAALFVATLIVGAVV
NYVVAQLVQKTGLSGTDRVLGVVFGGLRGVLIIAAVLFFIDAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLP
GAK
>Mature_163_residues
MIWIDFVILGVISLSAFISLIRGFVKEALSLVIWFGAFFVASNFYPKLAAYFTNIHDEMVRNGSAIAALFVATLIVGAVV
NYVVAQLVQKTGLSGTDRVLGVVFGGLRGVLIIAAVLFFIDAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLP
GAK

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=162, Percent_Identity=67.2839506172839, Blast_Score=223, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 17972; Mature: 17972

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWIDFVILGVISLSAFISLIRGFVKEALSLVIWFGAFFVASNFYPKLAAYFTNIHDEMV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RNGSAIAALFVATLIVGAVVNYVVAQLVQKTGLSGTDRVLGVVFGGLRGVLIIAAVLFFI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLPGAK
HHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIWIDFVILGVISLSAFISLIRGFVKEALSLVIWFGAFFVASNFYPKLAAYFTNIHDEMV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RNGSAIAALFVATLIVGAVVNYVVAQLVQKTGLSGTDRVLGVVFGGLRGVLIIAAVLFFI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTSLSDSEWWKQSQLIPQFSVVIEWFFDYLKDTSSFLPGAK
HHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]