Click here to switch to the map view.

The map label for this gene is accD [H]

Identifier: 209694635

GI number: 209694635

Start: 1171682

End: 1172572

Strand: Direct

Name: accD [H]

Synonym: VSAL_I1076

Alternate gene names: 209694635

Gene position: 1171682-1172572 (Clockwise)

Preceding gene: 209694634

Following gene: 209694636

Centisome position: 35.24

GC content: 41.08

Gene sequence:

>891_bases
ATGAGTTGGCTTGAAAAGATTTTTAATACAAGCAATATTGTTAGTTCACGTAAAGCATCTATCCCTGAAGGGGTTTGGAC
GAAGTGTACGTCATGTGAACAAGTGCTTTATTCAGCAGAGCTAGAGCGTAATCTAGAAGTATGCCCAAAATGTGATCATC
ACATGCGTATGAAAGCTCGTAAGCGCCTAGAAACATTTTTAGATGCGGAAGGTCGTGTTGAGCTTGGTCAAGAATTTGAA
CCAAAAGATCTTTTAAAATTTAAAGATTCAAAGCGCTATAAAGATCGTATTTCAGCAGCACAAAAATCAAGTAATGAAAC
CGATGCGCTTATCGTAATGCAAGGCACATTGTTAGAATTGCCTATCGTTGCTTGTGCATTTGAATTCTCCTTCATGGGGG
GGTCTATGGGTTCAGTTGTCGGCGCTCGCTTTGTTAAAGCGGTTGATGCTGCGATTGAAAACAACTGTCCATTAGTGTGT
TTCTCTGCAAGTGGCGGTGCTCGTATGCAAGAGGCGCTTATGTCTCTAATGCAAATGGCAAAAACAAGTGCGGCACTGGC
TCGTTTATCTCGTAAAGGCCTACCATTCTTCTCTGTATTAACTGACCCTACAATGGGCGGTGTTTCTGCAAGTTTAGCAA
TGCTGGGTGATATTAATATCGGTGAACCTAAAGCATTAATTGGCTTTGCTGGTCGTCGTGTTATTGAGCAAACAGTACGT
GAAGATTTACCTGAAGGTTTCCAACGCAGTGAATTTTTATTAGAGCACGGTGCTATTGATATGATTGTTGACCGTCGTGA
AATGCGTCAACGTATTGGTGGTTTGATGGCTAAAATGACAAACCAAGCATCACCATTAGTTGTTCCTGTTGATGGTTCTG
TAAAAAATTAA

Upstream 100 bases:

>100_bases
TTTTTTATCTACACTGGTCATTATTTATGGTTTAATCATCGTTAATTGAATTTATTTCTCTTGCGATGGTGCGAGAGATC
ACTAATAGAAAAGGTCGTCC

Downstream 100 bases:

>100_bases
ATCAAATGTAAATTGTCTTAGGGGGTTATTTCTTTCTTTAAATAAGTACCTTAAGTCAATATACTGTAACTACGTTCCGT
CAGTGAAGTAGTTGAACAAT

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKARKRLETFLDAEGRVELGQEFE
PKDLLKFKDSKRYKDRISAAQKSSNETDALIVMQGTLLELPIVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVC
FSASGGARMQEALMSLMQMAKTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVR
EDLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQASPLVVPVDGSVKN

Sequences:

>Translated_296_residues
MSWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKARKRLETFLDAEGRVELGQEFE
PKDLLKFKDSKRYKDRISAAQKSSNETDALIVMQGTLLELPIVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVC
FSASGGARMQEALMSLMQMAKTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVR
EDLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQASPLVVPVDGSVKN
>Mature_295_residues
SWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKARKRLETFLDAEGRVELGQEFEP
KDLLKFKDSKRYKDRISAAQKSSNETDALIVMQGTLLELPIVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVCF
SASGGARMQEALMSLMQMAKTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVRE
DLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQASPLVVPVDGSVKN

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=285, Percent_Identity=73.6842105263158, Blast_Score=445, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 32581; Mature: 32450

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKAR
CCHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KRLETFLDAEGRVELGQEFEPKDLLKFKDSKRYKDRISAAQKSSNETDALIVMQGTLLEL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH
PIVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVCFSASGGARMQEALMSLMQMA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
KTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVR
HHHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EDLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQASPLVVPVDGSVKN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
>Mature Secondary Structure 
SWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKAR
CHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KRLETFLDAEGRVELGQEFEPKDLLKFKDSKRYKDRISAAQKSSNETDALIVMQGTLLEL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH
PIVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVCFSASGGARMQEALMSLMQMA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
KTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVR
HHHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EDLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQASPLVVPVDGSVKN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA