Click here to switch to the map view.

The map label for this gene is ycgL [C]

Identifier: 209694627

GI number: 209694627

Start: 1159542

End: 1159823

Strand: Direct

Name: ycgL [C]

Synonym: VSAL_I1068

Alternate gene names: 209694627

Gene position: 1159542-1159823 (Clockwise)

Preceding gene: 209694623

Following gene: 209694628

Centisome position: 34.87

GC content: 32.27

Gene sequence:

>282_bases
ATGTACTGTTCGATTTATAAAAGCTCTAAAAAGCAAGGTGCTTATCTTTATATTGAGAAAAAAGATGATTTTTCTCCAGT
ACCTCAAGAATTGATGACAATGTTTGGTACGCCAAAAATGGTTATGGTGGTAAATTTAGAAGGCAGAAAATTAGCCTCTG
TTGATATTGAAAAAGTAGAAGTTTCTTTAAAAAATGACGGCTATTTTTTACAATTACCGCCACCTCCTGAAAATTTGCTT
GAGAAATACAAGCAAGATAAAGCCAAACGAAACGAGAAATAA

Upstream 100 bases:

>100_bases
TGTCTTAAGTGTACTTTCTAACAAGGCTCTCATCAAATAGACAGGAGAAGAGACTTCTGGATTGGGAGCAATATCAACTC
TATCAATATTAGGTTCTAAA

Downstream 100 bases:

>100_bases
TATGAAGAAAAGATTACTGCTAGGGATAGTCAGTTTGTTAATGGCCACAAGCGTATCTGCGAATACGCCTGAAGGGGATT
TCCAGGATTATATCGTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MYCSIYKSSKKQGAYLYIEKKDDFSPVPQELMTMFGTPKMVMVVNLEGRKLASVDIEKVEVSLKNDGYFLQLPPPPENLL
EKYKQDKAKRNEK

Sequences:

>Translated_93_residues
MYCSIYKSSKKQGAYLYIEKKDDFSPVPQELMTMFGTPKMVMVVNLEGRKLASVDIEKVEVSLKNDGYFLQLPPPPENLL
EKYKQDKAKRNEK
>Mature_93_residues
MYCSIYKSSKKQGAYLYIEKKDDFSPVPQELMTMFGTPKMVMVVNLEGRKLASVDIEKVEVSLKNDGYFLQLPPPPENLL
EKYKQDKAKRNEK

Specific function: Unknown

COG id: COG3100

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0745 family

Homologues:

Organism=Escherichia coli, GI308199518, Length=84, Percent_Identity=58.3333333333333, Blast_Score=106, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1068_ALISL (B6EIV9)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002262555.1
- GeneID:   6988805
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I1068
- HOGENOM:   HBG754037
- OMA:   KRICSIY
- ProtClustDB:   CLSK874615
- HAMAP:   MF_01866
- InterPro:   IPR007840
- ProDom:   PD030374

Pfam domain/function: PF05166 YcgL

EC number: NA

Molecular weight: Translated: 10780; Mature: 10780

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCSIYKSSKKQGAYLYIEKKDDFSPVPQELMTMFGTPKMVMVVNLEGRKLASVDIEKVE
CEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEECEEEEEE
VSLKNDGYFLQLPPPPENLLEKYKQDKAKRNEK
EEECCCCEEEECCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYCSIYKSSKKQGAYLYIEKKDDFSPVPQELMTMFGTPKMVMVVNLEGRKLASVDIEKVE
CEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCCEEEECEEEEEE
VSLKNDGYFLQLPPPPENLLEKYKQDKAKRNEK
EEECCCCEEEECCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA