| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is mltB [H]
Identifier: 209694628
GI number: 209694628
Start: 1159825
End: 1160799
Strand: Direct
Name: mltB [H]
Synonym: VSAL_I1069
Alternate gene names: 209694628
Gene position: 1159825-1160799 (Clockwise)
Preceding gene: 209694627
Following gene: 209694630
Centisome position: 34.88
GC content: 40.51
Gene sequence:
>975_bases ATGAAGAAAAGATTACTGCTAGGGATAGTCAGTTTGTTAATGGCCACAAGCGTATCTGCGAATACGCCTGAAGGGGATTT CCAGGATTATATCGTTAACTTAAAAAATGAAGCGCGCGAGAATGGTATTTCAGAGCCTATTTTAGAACGAGCGTTTAAAA ATGTGGCTTTTAAAGAAAAAGCGGTTAAATCTGATCGGAATCAGCCAGAAAAAAAATTAACACTAGATGAATATATTCCA CGAGCAGTACCAAAGTGGAAGATAAAACAAGCGAACGATTTATATCAAAAACACCATGAAGTGCTTACTAGAATTGGCAA AGAATATGGGGTTCAACCTCGATTTATCGTCGCATTATGGGGTGTTGAAAGTAATTTTGGTAAGCTAACGGGGGGTTATA ATGTGATAGAAGCATTAACTACGTTGGCTTATGATGGTCGCCGTGAAGCCTTTTTTAGAAAGCAAACAATGGCGGCATTA ACCATTTTAGAACAAGGTCACATTACCCCTGAAAACATGAAAGGTTCATGGGCAGGTGCAATGGGGCAATGCCAGTTTAT GCCAACGTCATTTTTGGCTTATGCTGTTGATGGCAATGATGATGGTCGTAAAGATATTTGGACGACTCATGCCGATGTGT TCGCTTCTGCGGCGAATTACTTAAAACAAGTGGGTTGGGATGATACGTATACTTGGGGTCGTCAGGTAACATTGCCTGAT GCTTTTGATGCCGAAGCCCTAAAGGGACTTTCTGAAGATAAAGGAAAGTTACTCTCTGAATGGGGGGCATTAGGGGTTCG TCGTTTAAATGGAAAGTCGTTACCTAATGTTGAGTTAGAAGCATGGTTAGTGCAACCAGACGATAATGATGGTCGTGCTT ACCTTGTTTATAATAACTATCAAGTGTTAATGGATTGGAATCGCTCGCATTATTTTGCATTAGCGGTGAGCCACTTGGCT GATTCTATTAAGTAA
Upstream 100 bases:
>100_bases TCTTTAAAAAATGACGGCTATTTTTTACAATTACCGCCACCTCCTGAAAATTTGCTTGAGAAATACAAGCAAGATAAAGC CAAACGAAACGAGAAATAAT
Downstream 100 bases:
>100_bases AAGATCAAGATTTAGGTAGCTGTGATCAGAGGAGTTCGTTATGAGTTTATCATTTACAACGAACTCCCCTGAAACGGGTA AGAGAGCTTGCGACCGAGCT
Product: hypothetical protein
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKKRLLLGIVSLLMATSVSANTPEGDFQDYIVNLKNEARENGISEPILERAFKNVAFKEKAVKSDRNQPEKKLTLDEYIP RAVPKWKIKQANDLYQKHHEVLTRIGKEYGVQPRFIVALWGVESNFGKLTGGYNVIEALTTLAYDGRREAFFRKQTMAAL TILEQGHITPENMKGSWAGAMGQCQFMPTSFLAYAVDGNDDGRKDIWTTHADVFASAANYLKQVGWDDTYTWGRQVTLPD AFDAEALKGLSEDKGKLLSEWGALGVRRLNGKSLPNVELEAWLVQPDDNDGRAYLVYNNYQVLMDWNRSHYFALAVSHLA DSIK
Sequences:
>Translated_324_residues MKKRLLLGIVSLLMATSVSANTPEGDFQDYIVNLKNEARENGISEPILERAFKNVAFKEKAVKSDRNQPEKKLTLDEYIP RAVPKWKIKQANDLYQKHHEVLTRIGKEYGVQPRFIVALWGVESNFGKLTGGYNVIEALTTLAYDGRREAFFRKQTMAAL TILEQGHITPENMKGSWAGAMGQCQFMPTSFLAYAVDGNDDGRKDIWTTHADVFASAANYLKQVGWDDTYTWGRQVTLPD AFDAEALKGLSEDKGKLLSEWGALGVRRLNGKSLPNVELEAWLVQPDDNDGRAYLVYNNYQVLMDWNRSHYFALAVSHLA DSIK >Mature_324_residues MKKRLLLGIVSLLMATSVSANTPEGDFQDYIVNLKNEARENGISEPILERAFKNVAFKEKAVKSDRNQPEKKLTLDEYIP RAVPKWKIKQANDLYQKHHEVLTRIGKEYGVQPRFIVALWGVESNFGKLTGGYNVIEALTTLAYDGRREAFFRKQTMAAL TILEQGHITPENMKGSWAGAMGQCQFMPTSFLAYAVDGNDDGRKDIWTTHADVFASAANYLKQVGWDDTYTWGRQVTLPD AFDAEALKGLSEDKGKLLSEWGALGVRRLNGKSLPNVELEAWLVQPDDNDGRAYLVYNNYQVLMDWNRSHYFALAVSHLA DSIK
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=232, Percent_Identity=31.8965517241379, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 36572; Mature: 36572
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRLLLGIVSLLMATSVSANTPEGDFQDYIVNLKNEARENGISEPILERAFKNVAFKEK CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AVKSDRNQPEKKLTLDEYIPRAVPKWKIKQANDLYQKHHEVLTRIGKEYGVQPRFIVALW HHHHCCCCCHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE GVESNFGKLTGGYNVIEALTTLAYDGRREAFFRKQTMAALTILEQGHITPENMKGSWAGA CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC MGQCQFMPTSFLAYAVDGNDDGRKDIWTTHADVFASAANYLKQVGWDDTYTWGRQVTLPD CCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC AFDAEALKGLSEDKGKLLSEWGALGVRRLNGKSLPNVELEAWLVQPDDNDGRAYLVYNNY CCCHHHHCCCCHHHHHHHHHHHHHCEEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCE QVLMDWNRSHYFALAVSHLADSIK EEEEECCCCEEHHHHHHHHHHHCC >Mature Secondary Structure MKKRLLLGIVSLLMATSVSANTPEGDFQDYIVNLKNEARENGISEPILERAFKNVAFKEK CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AVKSDRNQPEKKLTLDEYIPRAVPKWKIKQANDLYQKHHEVLTRIGKEYGVQPRFIVALW HHHHCCCCCHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE GVESNFGKLTGGYNVIEALTTLAYDGRREAFFRKQTMAALTILEQGHITPENMKGSWAGA CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC MGQCQFMPTSFLAYAVDGNDDGRKDIWTTHADVFASAANYLKQVGWDDTYTWGRQVTLPD CCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC AFDAEALKGLSEDKGKLLSEWGALGVRRLNGKSLPNVELEAWLVQPDDNDGRAYLVYNNY CCCHHHHCCCCHHHHHHHHHHHHHCEEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCE QVLMDWNRSHYFALAVSHLADSIK EEEEECCCCEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]