Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694599

Identifier: 209694599

GI number: 209694599

Start: 1132101

End: 1132340

Strand: Direct

Name: 209694599

Synonym: VSAL_I1039

Alternate gene names: NA

Gene position: 1132101-1132340 (Clockwise)

Preceding gene: 209694598

Following gene: 209694600

Centisome position: 34.05

GC content: 40.42

Gene sequence:

>240_bases
ATGGATGCAACCTGGACAAACGCTTTAATCGGTGCGCTTTCATTACTAACCTTTTTGCTTGGCGCACTCATTACCAAATT
CTTTTCTGTAACAAAAGAGTTAGCCGACTTTAAAACTCACGTAGCAGAAACCTATGCAACAAAAGATGAAGTGAAAGATG
CAATTGAGCGTGTAGAACGCCAGATTGAGATCGGCTTCAACCGTATTTATGAAACCTTAAACAAGAGAGATGCAGCATGA

Upstream 100 bases:

>100_bases
ATGACGTTATGCAAGACACGGTAGATGATGTGTTGCAATCACTGCAGGGTAAGCGTTTAAAAGAGGTGCCTATTATCTCA
GCCAAACAAAAGGAATAGCC

Downstream 100 bases:

>100_bases
CAACCCCAATCATCATTACAGCAGCAGGCAAAGATTTACGTTTTACTCCTGATTTACCAACGTACAACAAATACATCAAT
GAAATGATGCCACATGACAA

Product: protein, phage gene

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MDATWTNALIGALSLLTFLLGALITKFFSVTKELADFKTHVAETYATKDEVKDAIERVERQIEIGFNRIYETLNKRDAA

Sequences:

>Translated_79_residues
MDATWTNALIGALSLLTFLLGALITKFFSVTKELADFKTHVAETYATKDEVKDAIERVERQIEIGFNRIYETLNKRDAA
>Mature_79_residues
MDATWTNALIGALSLLTFLLGALITKFFSVTKELADFKTHVAETYATKDEVKDAIERVERQIEIGFNRIYETLNKRDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8938; Mature: 8938

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATWTNALIGALSLLTFLLGALITKFFSVTKELADFKTHVAETYATKDEVKDAIERVER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIEIGFNRIYETLNKRDAA
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDATWTNALIGALSLLTFLLGALITKFFSVTKELADFKTHVAETYATKDEVKDAIERVER
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIEIGFNRIYETLNKRDAA
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA