Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694600

Identifier: 209694600

GI number: 209694600

Start: 1132337

End: 1132600

Strand: Direct

Name: 209694600

Synonym: VSAL_I1040

Alternate gene names: NA

Gene position: 1132337-1132600 (Clockwise)

Preceding gene: 209694599

Following gene: 209694601

Centisome position: 34.05

GC content: 37.5

Gene sequence:

>264_bases
ATGACAACCCCAATCATCATTACAGCAGCAGGCAAAGATTTACGTTTTACTCCTGATTTACCAACGTACAACAAATACAT
CAATGAAATGATGCCACATGACAAAGTGTCACCAGCAACCAATTATCTGCGTCGTATCGTTCATAAAGACGATAAAGCAC
ATTTAGATGAAATGCTGAAAATTCCAAGTGCTTTGATGCGTATCCTGGCAAAAGTAAATGACGCTTTTGAAGGTGATCTG
GAAATCGAAGTAAAAAACTCTTAA

Upstream 100 bases:

>100_bases
CAACAAAAGATGAAGTGAAAGATGCAATTGAGCGTGTAGAACGCCAGATTGAGATCGGCTTCAACCGTATTTATGAAACC
TTAAACAAGAGAGATGCAGC

Downstream 100 bases:

>100_bases
GGCACGTCAAAGCGATTGAAAGTAATGGGCTAGAGCAAGCATTAGCATTGAAAGCCCATTACCTACCCAATCAACCTGAT
ACCACCGAGAATTTAGCCAG

Product: orf30

Products: NA

Alternate protein names: Phage Protein

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTTPIIITAAGKDLRFTPDLPTYNKYINEMMPHDKVSPATNYLRRIVHKDDKAHLDEMLKIPSALMRILAKVNDAFEGDL
EIEVKNS

Sequences:

>Translated_87_residues
MTTPIIITAAGKDLRFTPDLPTYNKYINEMMPHDKVSPATNYLRRIVHKDDKAHLDEMLKIPSALMRILAKVNDAFEGDL
EIEVKNS
>Mature_86_residues
TTPIIITAAGKDLRFTPDLPTYNKYINEMMPHDKVSPATNYLRRIVHKDDKAHLDEMLKIPSALMRILAKVNDAFEGDLE
IEVKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9926; Mature: 9794

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPIIITAAGKDLRFTPDLPTYNKYINEMMPHDKVSPATNYLRRIVHKDDKAHLDEMLK
CCCCEEEEECCCCCEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
IPSALMRILAKVNDAFEGDLEIEVKNS
HHHHHHHHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure 
TTPIIITAAGKDLRFTPDLPTYNKYINEMMPHDKVSPATNYLRRIVHKDDKAHLDEMLK
CCCEEEEECCCCCEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
IPSALMRILAKVNDAFEGDLEIEVKNS
HHHHHHHHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA