Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694594

Identifier: 209694594

GI number: 209694594

Start: 1129637

End: 1130749

Strand: Direct

Name: 209694594

Synonym: VSAL_I1034

Alternate gene names: NA

Gene position: 1129637-1130749 (Clockwise)

Preceding gene: 209694593

Following gene: 209694595

Centisome position: 33.97

GC content: 43.22

Gene sequence:

>1113_bases
ATGGCGTGGCCAATTGTACAAATTAATACTCTGAACCTGATGCAAGGACCAGTGAACGAAGTTGAACGTCACTTCCTCTA
TGTCGGTTTAGGAACTAAGAACGCAGGCAGTTTATTGTCTGTGAACACACAAAGTGATTTTTCAGCGCTATTGGATGATG
GCTCAGAATTAAAAGCCAATGTTGAAGCAGCAATGCTGAACGCTGGTCAAAACTGGACTGCAGGCGTTTATGTATTAACA
GCCCCTGAAAACTGGGTTGAAGCCGTTAAAACCGCGCAACAAACTCAAAGTTTTGAAGCGGTCGTATTAACAGCGCCAAC
AACAGATAAAGCCACCGTGACTGCAGCCCAAGCGCTTTATCATGAGCTGATTGCTAAATATGGTCGTTGGACATTCATGA
TGCTTGCGACACCAGGTATTGATAAGAAAACACAAACCTGGTCTGAATATGAAGCAGCAACCGTTGCCATTCAAGATACG
ATTGCCGCTGATGGTGTCATGTTAGTACCACAAATATTCCCTGATGCTATTGGCAAACTTGCTGGCCGTTTATGTAATCG
AGCCGCTTCAATTGCTGATACACCAATGCGTATTAAAACAGGTCCATTAGTTGGTGATGTCACTTTGCCTGTTGATAGTG
CTGGTGCAGAGCTAACAACGGCAACCTTACAAACATTAGAAAGTAATCGTTTTTCAGTCCCTGCTTGGTTTCCTGATTAC
GATGGTATTTTCTGGGCTGATGGTCGTTTATTAGATGCTGAAGGCGGTGATTATCAGGTGATTGAATATCGCCGAATTAT
CGACAAAGTGGCTCGTCGTATTCGATTAATTGCCATTTCTGATATTGGTGACCGTTCTTTCAATAGTACGCCTGCTAGTA
CTGCTCGTGCTCAAAATCGTTATTGTCGACCACTGCGTGAAATGGCTAAATCAGCCACCGTTGGTGAGATGGTATTCCCT
GGTGAAATTGAAACCCCAAGTTCAGATGACATCACCATCATGTGGGAAAACAAAAATTCAGTCGGTATTTATATGGCAGC
ACAGCCGAAAGATTGCCCGAAGAAAATTACGGCAAATCTAATGTTAGATTTAAGTAATCCGGGGGACAAATAA

Upstream 100 bases:

>100_bases
CAAAATACCAGCAAGACCGTTCTTGCAGATAGACAAGAAACAAATGCGAAAAATAGCAAAAGAAGAACTGAATTCTCGTT
AACCCAAAAGAGGAAGAGCA

Downstream 100 bases:

>100_bases
TGTCTAAACGTATTTCAGGATTAAGTTTTGATGTTGATATTCATGGTGTACTTATCCATGTGGAAAAAGCGACAGTCACC
ATTTCAGATGAAAGTGCAGC

Product: tail sheat protein

Products: NA

Alternate protein names: Tail Sheath Protein; Phage Gene; Phage Protein; Tail Sheath; Tail Sheath Protein Bacteriophage Origin; Biotin Carboxylase; Tail Sheat Protein

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MAWPIVQINTLNLMQGPVNEVERHFLYVGLGTKNAGSLLSVNTQSDFSALLDDGSELKANVEAAMLNAGQNWTAGVYVLT
APENWVEAVKTAQQTQSFEAVVLTAPTTDKATVTAAQALYHELIAKYGRWTFMMLATPGIDKKTQTWSEYEAATVAIQDT
IAADGVMLVPQIFPDAIGKLAGRLCNRAASIADTPMRIKTGPLVGDVTLPVDSAGAELTTATLQTLESNRFSVPAWFPDY
DGIFWADGRLLDAEGGDYQVIEYRRIIDKVARRIRLIAISDIGDRSFNSTPASTARAQNRYCRPLREMAKSATVGEMVFP
GEIETPSSDDITIMWENKNSVGIYMAAQPKDCPKKITANLMLDLSNPGDK

Sequences:

>Translated_370_residues
MAWPIVQINTLNLMQGPVNEVERHFLYVGLGTKNAGSLLSVNTQSDFSALLDDGSELKANVEAAMLNAGQNWTAGVYVLT
APENWVEAVKTAQQTQSFEAVVLTAPTTDKATVTAAQALYHELIAKYGRWTFMMLATPGIDKKTQTWSEYEAATVAIQDT
IAADGVMLVPQIFPDAIGKLAGRLCNRAASIADTPMRIKTGPLVGDVTLPVDSAGAELTTATLQTLESNRFSVPAWFPDY
DGIFWADGRLLDAEGGDYQVIEYRRIIDKVARRIRLIAISDIGDRSFNSTPASTARAQNRYCRPLREMAKSATVGEMVFP
GEIETPSSDDITIMWENKNSVGIYMAAQPKDCPKKITANLMLDLSNPGDK
>Mature_369_residues
AWPIVQINTLNLMQGPVNEVERHFLYVGLGTKNAGSLLSVNTQSDFSALLDDGSELKANVEAAMLNAGQNWTAGVYVLTA
PENWVEAVKTAQQTQSFEAVVLTAPTTDKATVTAAQALYHELIAKYGRWTFMMLATPGIDKKTQTWSEYEAATVAIQDTI
AADGVMLVPQIFPDAIGKLAGRLCNRAASIADTPMRIKTGPLVGDVTLPVDSAGAELTTATLQTLESNRFSVPAWFPDYD
GIFWADGRLLDAEGGDYQVIEYRRIIDKVARRIRLIAISDIGDRSFNSTPASTARAQNRYCRPLREMAKSATVGEMVFPG
EIETPSSDDITIMWENKNSVGIYMAAQPKDCPKKITANLMLDLSNPGDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40317; Mature: 40186

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWPIVQINTLNLMQGPVNEVERHFLYVGLGTKNAGSLLSVNTQSDFSALLDDGSELKAN
CCCCEEEEEEEHHCCCCHHHHCCEEEEEEECCCCCCCEEEECCCHHHHHHHCCCCHHHHH
VEAAMLNAGQNWTAGVYVLTAPENWVEAVKTAQQTQSFEAVVLTAPTTDKATVTAAQALY
HEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH
HELIAKYGRWTFMMLATPGIDKKTQTWSEYEAATVAIQDTIAADGVMLVPQIFPDAIGKL
HHHHHHCCCEEEEEEECCCCCCCCCCHHHHCEEEEEEEHHHCCCCEEECHHHHHHHHHHH
AGRLCNRAASIADTPMRIKTGPLVGDVTLPVDSAGAELTTATLQTLESNRFSVPAWFPDY
HHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEECCEECCCC
DGIFWADGRLLDAEGGDYQVIEYRRIIDKVARRIRLIAISDIGDRSFNSTPASTARAQNR
CCEEEECCEEEECCCCCEEEHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHH
YCRPLREMAKSATVGEMVFPGEIETPSSDDITIMWENKNSVGIYMAAQPKDCPKKITANL
HHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHEEEEE
MLDLSNPGDK
EEEECCCCCC
>Mature Secondary Structure 
AWPIVQINTLNLMQGPVNEVERHFLYVGLGTKNAGSLLSVNTQSDFSALLDDGSELKAN
CCCEEEEEEEHHCCCCHHHHCCEEEEEEECCCCCCCEEEECCCHHHHHHHCCCCHHHHH
VEAAMLNAGQNWTAGVYVLTAPENWVEAVKTAQQTQSFEAVVLTAPTTDKATVTAAQALY
HEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH
HELIAKYGRWTFMMLATPGIDKKTQTWSEYEAATVAIQDTIAADGVMLVPQIFPDAIGKL
HHHHHHCCCEEEEEEECCCCCCCCCCHHHHCEEEEEEEHHHCCCCEEECHHHHHHHHHHH
AGRLCNRAASIADTPMRIKTGPLVGDVTLPVDSAGAELTTATLQTLESNRFSVPAWFPDY
HHHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHCCCEECCEECCCC
DGIFWADGRLLDAEGGDYQVIEYRRIIDKVARRIRLIAISDIGDRSFNSTPASTARAQNR
CCEEEECCEEEECCCCCEEEHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHH
YCRPLREMAKSATVGEMVFPGEIETPSSDDITIMWENKNSVGIYMAAQPKDCPKKITANL
HHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHEEEEE
MLDLSNPGDK
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA