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The map label for this gene is 209694586

Identifier: 209694586

GI number: 209694586

Start: 1121868

End: 1122902

Strand: Reverse

Name: 209694586

Synonym: VSAL_I1025

Alternate gene names: NA

Gene position: 1122902-1121868 (Counterclockwise)

Preceding gene: 209694587

Following gene: 209694585

Centisome position: 33.77

GC content: 42.13

Gene sequence:

>1035_bases
ATGACCGAGCAAGCAAACACTTTAGTAACACAAGATAAACCAAAAGACGATTCGGTTTATCATATCGACTCATCACCCGA
GGCTGTTGATGCAAGCAGTTGGATGACTTCATACTCTGATTTGTTTTATAACGAGTTTGATGATTATTGGGAGCCGCCAA
TCTCGCGCCAAGGGCTATCTGATACCTCACGCGCTAACGCTTATCATTGCTCACTGCTTAGGGCTCGAGCTAATTATGTA
TCTGCACGCTTTGAAGGTGGCGGCGGCTTAACACGTCGACAACTTCAATTTTATTGCAATAATTACTTTACCTTTGGTGA
TGTGGCATTTTTAAAAATACGCAATGGCTTTGGTGTGCCGGTTCGCCTCTTCCCTTTACCAAGTATGCATTTACGTAAAC
GTAAAAATGGAGACTTTGCCCTTCTTGAGCGAGATGGCAAACAACGCACTTACAAAGCAAAAGACGTTATCTTTTTGGCT
CAAGATGATTTACAGCAACAAGTTTACGGCCTGCCTGATTATTTAGGCAGCTTACAAAGCAGTTTGTTAAATAAAGATGC
CACGTTATTCCGTCGTCGTTACTTCAAGAACGGCGCACACATGGGCTTTATCTTTTACGCTTCGGATCCCAACTTAAGCG
AAGAAGATGAAAAGAAAATGAAAGAGACCATTGCCAGCTCTAAAGGCGTGGGGAACTTCCGTAGTATGTTTGTGAATATT
CCGAACGGTAAAGAGAAAGGCATTCAATTAATTCCGGTTGGCGACATTGCCACTAAAGACGAATTTGAGCGAATTAAAAA
CATTACCGCTCAAGATATTCTTGTTGGCCATCGAGTACCGGCAGGCAAAGGGGGCATAATGCCGCAACCTGGTTCTAGTT
TTCCTGACCCTGAAAAAGTAGGTCGTGAATACGATAAAGACGAGGTTATCCCTGTTTGTAAATTAATTATGGATGAAGTG
AACAACGACCCTGAAATCATCCACCGTAAACATTTACATTTACGCTTTAACATTGACATAGAAAAGACCGCTTAA

Upstream 100 bases:

>100_bases
CCACAGGCCATGCCGACGCCTTCTGGGCAATCTCGCACGCAATCATAAACGAGCCATTGGATCACTCATCACCAACCAAA
TCAACGTGGGAAACCGCAAA

Downstream 100 bases:

>100_bases
AGAATAAAACACCTTCACGCAAACCGTTTCGTTTTACTGTACATAAACACAGCAAGGAACATATAATGGTTTTGTCAGTC
AGAGAGGTGTTTATGCGAGT

Product: phage portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTEQANTLVTQDKPKDDSVYHIDSSPEAVDASSWMTSYSDLFYNEFDDYWEPPISRQGLSDTSRANAYHCSLLRARANYV
SARFEGGGGLTRRQLQFYCNNYFTFGDVAFLKIRNGFGVPVRLFPLPSMHLRKRKNGDFALLERDGKQRTYKAKDVIFLA
QDDLQQQVYGLPDYLGSLQSSLLNKDATLFRRRYFKNGAHMGFIFYASDPNLSEEDEKKMKETIASSKGVGNFRSMFVNI
PNGKEKGIQLIPVGDIATKDEFERIKNITAQDILVGHRVPAGKGGIMPQPGSSFPDPEKVGREYDKDEVIPVCKLIMDEV
NNDPEIIHRKHLHLRFNIDIEKTA

Sequences:

>Translated_344_residues
MTEQANTLVTQDKPKDDSVYHIDSSPEAVDASSWMTSYSDLFYNEFDDYWEPPISRQGLSDTSRANAYHCSLLRARANYV
SARFEGGGGLTRRQLQFYCNNYFTFGDVAFLKIRNGFGVPVRLFPLPSMHLRKRKNGDFALLERDGKQRTYKAKDVIFLA
QDDLQQQVYGLPDYLGSLQSSLLNKDATLFRRRYFKNGAHMGFIFYASDPNLSEEDEKKMKETIASSKGVGNFRSMFVNI
PNGKEKGIQLIPVGDIATKDEFERIKNITAQDILVGHRVPAGKGGIMPQPGSSFPDPEKVGREYDKDEVIPVCKLIMDEV
NNDPEIIHRKHLHLRFNIDIEKTA
>Mature_343_residues
TEQANTLVTQDKPKDDSVYHIDSSPEAVDASSWMTSYSDLFYNEFDDYWEPPISRQGLSDTSRANAYHCSLLRARANYVS
ARFEGGGGLTRRQLQFYCNNYFTFGDVAFLKIRNGFGVPVRLFPLPSMHLRKRKNGDFALLERDGKQRTYKAKDVIFLAQ
DDLQQQVYGLPDYLGSLQSSLLNKDATLFRRRYFKNGAHMGFIFYASDPNLSEEDEKKMKETIASSKGVGNFRSMFVNIP
NGKEKGIQLIPVGDIATKDEFERIKNITAQDILVGHRVPAGKGGIMPQPGSSFPDPEKVGREYDKDEVIPVCKLIMDEVN
NDPEIIHRKHLHLRFNIDIEKTA

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 39127; Mature: 38995

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQANTLVTQDKPKDDSVYHIDSSPEAVDASSWMTSYSDLFYNEFDDYWEPPISRQGLS
CCCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DTSRANAYHCSLLRARANYVSARFEGGGGLTRRQLQFYCNNYFTFGDVAFLKIRNGFGVP
CCHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCEEEECCEEEEEEECCCCCC
VRLFPLPSMHLRKRKNGDFALLERDGKQRTYKAKDVIFLAQDDLQQQVYGLPDYLGSLQS
EEEECCCCHHHHHCCCCCEEEEECCCCCCEEECCEEEEEEHHHHHHHHCCCHHHHHHHHH
SLLNKDATLFRRRYFKNGAHMGFIFYASDPNLSEEDEKKMKETIASSKGVGNFRSMFVNI
HHHCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEC
PNGKEKGIQLIPVGDIATKDEFERIKNITAQDILVGHRVPAGKGGIMPQPGSSFPDPEKV
CCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHEECCCCCCCCCCCCCCCCCCCCHHHH
GREYDKDEVIPVCKLIMDEVNNDPEIIHRKHLHLRFNIDIEKTA
CCCCCCCHHHHHHHHHHHHCCCCHHHEEEEEEEEEEEEEEECCC
>Mature Secondary Structure 
TEQANTLVTQDKPKDDSVYHIDSSPEAVDASSWMTSYSDLFYNEFDDYWEPPISRQGLS
CCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DTSRANAYHCSLLRARANYVSARFEGGGGLTRRQLQFYCNNYFTFGDVAFLKIRNGFGVP
CCHHCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCEEEECCEEEEEEECCCCCC
VRLFPLPSMHLRKRKNGDFALLERDGKQRTYKAKDVIFLAQDDLQQQVYGLPDYLGSLQS
EEEECCCCHHHHHCCCCCEEEEECCCCCCEEECCEEEEEEHHHHHHHHCCCHHHHHHHHH
SLLNKDATLFRRRYFKNGAHMGFIFYASDPNLSEEDEKKMKETIASSKGVGNFRSMFVNI
HHHCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEC
PNGKEKGIQLIPVGDIATKDEFERIKNITAQDILVGHRVPAGKGGIMPQPGSSFPDPEKV
CCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHEECCCCCCCCCCCCCCCCCCCCHHHH
GREYDKDEVIPVCKLIMDEVNNDPEIIHRKHLHLRFNIDIEKTA
CCCCCCCHHHHHHHHHHHHCCCCHHHEEEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]