The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694583

Identifier: 209694583

GI number: 209694583

Start: 1119972

End: 1120886

Strand: Direct

Name: 209694583

Synonym: VSAL_I1022

Alternate gene names: NA

Gene position: 1119972-1120886 (Clockwise)

Preceding gene: 209694582

Following gene: 209694584

Centisome position: 33.68

GC content: 38.36

Gene sequence:

>915_bases
ATGAACAACACATTATCAAAAACATTTTGCACATTAGTCCTATTATCATGTGCGGTTACCTCGGCTTATTTAACGTACCT
TTACATGAACGAGCTGGGCGCGGCCATTGGTGTTGCGGTTATATTTTCATTAATTGGAATTACCCTTGATTTGGTGAAAA
CAATCACGCCAACATTTATACCAACAATAGCCAAACAAAACCAATTTGTTGCGTTGTTATTGGTTGGGTTAACTGGCGTT
CTTATGGTTATTAGTACCATTGCTTCAATATCTGCAATTGAAAAGGGTGCAGATAACATGGCCGTATCTACAAAACAAAA
CGTTGCCATTACTGAACAAATAAAACTAAAACAACAGCAGCTCGTTAATTTGCAGCAACTATCAAATGAACAACTTCGCA
TTAACCACACAACCAAAGCGGCAGAAACCACGGTAATGATCTCAACCGTCACTGATGAATTAAACGCACTTTATCACGCG
CAATCAAGTGTAAAAAACACATCTATACTTCGTGAATATAATGCGATTATCACGCTGGTTATTGCTGTATCAATCGAAGT
GGTTTCTGTGGTTATGGCCCTTACTTTACACACATTAAATACACTTGAAGTAAGTGTAAAAAGTGTATCAAACCCAGTAA
ATACAAGGGATGCACCACCAAGTGAAATGCAAGTGGTTCAAAGTGTATTGCCAAGTGTAGAGCCGTTAAAAAGTGTAGAA
ATGCAGTTTGCCGCCAGTGTGATAGAAGAAGTAAAAGAAGCAATTTTAACTGGTGCCGTAAAGCCAAGCCAACGAGGGTT
AAAAGTCGCGTTTAATCTGCCACAAGAGCAAATCAAAATTATTCTAAATACCCTGCATGAGCAAAATATATTAGAGCCGT
GGAACAATAACGGCTACAAAGTTAAAGAGGCGTAA

Upstream 100 bases:

>100_bases
TGCACCTGCACCTGCACCGTTCGGTTTCGTTATACCACCGGAAAATATCAGTTAGTTTCATCTTCATACTGCCATGCTTC
ACTAAACTAAAGGAATAATT

Downstream 100 bases:

>100_bases
AGCTGGCTGGTCATGATAAAAGCGTCGGTCGAGCTTGGGATTTTACGGATCAATAAAATTGATTGTTATTGTTGTTTGTG
TGGTGCAGTCAAGGGGTAGG

Product: membrane protein, phage gene

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNNTLSKTFCTLVLLSCAVTSAYLTYLYMNELGAAIGVAVIFSLIGITLDLVKTITPTFIPTIAKQNQFVALLLVGLTGV
LMVISTIASISAIEKGADNMAVSTKQNVAITEQIKLKQQQLVNLQQLSNEQLRINHTTKAAETTVMISTVTDELNALYHA
QSSVKNTSILREYNAIITLVIAVSIEVVSVVMALTLHTLNTLEVSVKSVSNPVNTRDAPPSEMQVVQSVLPSVEPLKSVE
MQFAASVIEEVKEAILTGAVKPSQRGLKVAFNLPQEQIKIILNTLHEQNILEPWNNNGYKVKEA

Sequences:

>Translated_304_residues
MNNTLSKTFCTLVLLSCAVTSAYLTYLYMNELGAAIGVAVIFSLIGITLDLVKTITPTFIPTIAKQNQFVALLLVGLTGV
LMVISTIASISAIEKGADNMAVSTKQNVAITEQIKLKQQQLVNLQQLSNEQLRINHTTKAAETTVMISTVTDELNALYHA
QSSVKNTSILREYNAIITLVIAVSIEVVSVVMALTLHTLNTLEVSVKSVSNPVNTRDAPPSEMQVVQSVLPSVEPLKSVE
MQFAASVIEEVKEAILTGAVKPSQRGLKVAFNLPQEQIKIILNTLHEQNILEPWNNNGYKVKEA
>Mature_304_residues
MNNTLSKTFCTLVLLSCAVTSAYLTYLYMNELGAAIGVAVIFSLIGITLDLVKTITPTFIPTIAKQNQFVALLLVGLTGV
LMVISTIASISAIEKGADNMAVSTKQNVAITEQIKLKQQQLVNLQQLSNEQLRINHTTKAAETTVMISTVTDELNALYHA
QSSVKNTSILREYNAIITLVIAVSIEVVSVVMALTLHTLNTLEVSVKSVSNPVNTRDAPPSEMQVVQSVLPSVEPLKSVE
MQFAASVIEEVKEAILTGAVKPSQRGLKVAFNLPQEQIKIILNTLHEQNILEPWNNNGYKVKEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33030; Mature: 33030

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTLSKTFCTLVLLSCAVTSAYLTYLYMNELGAAIGVAVIFSLIGITLDLVKTITPTFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
PTIAKQNQFVALLLVGLTGVLMVISTIASISAIEKGADNMAVSTKQNVAITEQIKLKQQQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHH
LVNLQQLSNEQLRINHTTKAAETTVMISTVTDELNALYHAQSSVKNTSILREYNAIITLV
HHHHHHCCCCCEEEECCCHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVSIEVVSVVMALTLHTLNTLEVSVKSVSNPVNTRDAPPSEMQVVQSVLPSVEPLKSVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
MQFAASVIEEVKEAILTGAVKPSQRGLKVAFNLPQEQIKIILNTLHEQNILEPWNNNGYK
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEE
VKEA
ECCC
>Mature Secondary Structure
MNNTLSKTFCTLVLLSCAVTSAYLTYLYMNELGAAIGVAVIFSLIGITLDLVKTITPTFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
PTIAKQNQFVALLLVGLTGVLMVISTIASISAIEKGADNMAVSTKQNVAITEQIKLKQQQ
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHH
LVNLQQLSNEQLRINHTTKAAETTVMISTVTDELNALYHAQSSVKNTSILREYNAIITLV
HHHHHHCCCCCEEEECCCHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVSIEVVSVVMALTLHTLNTLEVSVKSVSNPVNTRDAPPSEMQVVQSVLPSVEPLKSVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
MQFAASVIEEVKEAILTGAVKPSQRGLKVAFNLPQEQIKIILNTLHEQNILEPWNNNGYK
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEE
VKEA
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA