Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694575

Identifier: 209694575

GI number: 209694575

Start: 1114874

End: 1115356

Strand: Direct

Name: 209694575

Synonym: VSAL_I1014

Alternate gene names: NA

Gene position: 1114874-1115356 (Clockwise)

Preceding gene: 209694574

Following gene: 209694576

Centisome position: 33.53

GC content: 38.1

Gene sequence:

>483_bases
ATGGGAGCAATGAATATGAATGACTTAAAAACAGCAAAGCAGTTTTATCAAGCATCACTGGAACACCTTAATAAAGCGAA
TGAACTGCATGAAAAAATGGAAGCAACAGAAAGAAAAACGGTAGCGTTATTCTCTCGTTTTATTGATGGAACAAAATCTA
TTTCTGGCGATGTTGAACTTGTAGCGAAAGATAATCTTAAAGCAATCCAACAGCGCGATGTGTTAGCGGTGATTAATTCA
ATTGTTGCAATGACGATGGACTCGCCATCTTCTTTGGTTGTGAGTTTTAATTTTGGAACTCTTTACGACGGTACAGGGAC
TTTTTATGTTATTGCGTGGGAAAATACGGAAGAACGTGAAACTAAGCTCCATGAACACGCTGATTTGAGTGAATCTAATG
CACTTGCGCGATGTATTCAAATAGAAAGCAAATTTGCTGAACTTATCATTGAAGCAAAAGACAACGCAGAGGTAACGGCA
TGA

Upstream 100 bases:

>100_bases
AATAAGTTAAAACCGAGTCACTTCACCGCTTAGTACCAACACTTGTGAGCCTTTGCCCTCTAATAGGGGCTTTTTTTGTA
CCTAAATTTTGTTTTATTGC

Downstream 100 bases:

>100_bases
GTGTTATTTCTGTATATCAAGCTGATCTAGAATTTGCCCTTCGTGGTGCAGGTTTTACCTCTCGAAAAATCAACATGTTC
TTAAAAGCATTTAACAAAGA

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MGAMNMNDLKTAKQFYQASLEHLNKANELHEKMEATERKTVALFSRFIDGTKSISGDVELVAKDNLKAIQQRDVLAVINS
IVAMTMDSPSSLVVSFNFGTLYDGTGTFYVIAWENTEERETKLHEHADLSESNALARCIQIESKFAELIIEAKDNAEVTA

Sequences:

>Translated_160_residues
MGAMNMNDLKTAKQFYQASLEHLNKANELHEKMEATERKTVALFSRFIDGTKSISGDVELVAKDNLKAIQQRDVLAVINS
IVAMTMDSPSSLVVSFNFGTLYDGTGTFYVIAWENTEERETKLHEHADLSESNALARCIQIESKFAELIIEAKDNAEVTA
>Mature_159_residues
GAMNMNDLKTAKQFYQASLEHLNKANELHEKMEATERKTVALFSRFIDGTKSISGDVELVAKDNLKAIQQRDVLAVINSI
VAMTMDSPSSLVVSFNFGTLYDGTGTFYVIAWENTEERETKLHEHADLSESNALARCIQIESKFAELIIEAKDNAEVTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17820; Mature: 17689

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAMNMNDLKTAKQFYQASLEHLNKANELHEKMEATERKTVALFSRFIDGTKSISGDVEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VAKDNLKAIQQRDVLAVINSIVAMTMDSPSSLVVSFNFGTLYDGTGTFYVIAWENTEERE
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCEEEEEECCCCHHH
TKLHEHADLSESNALARCIQIESKFAELIIEAKDNAEVTA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GAMNMNDLKTAKQFYQASLEHLNKANELHEKMEATERKTVALFSRFIDGTKSISGDVEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VAKDNLKAIQQRDVLAVINSIVAMTMDSPSSLVVSFNFGTLYDGTGTFYVIAWENTEERE
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCCEEEEEECCCCHHH
TKLHEHADLSESNALARCIQIESKFAELIIEAKDNAEVTA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA