The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694534

Identifier: 209694534

GI number: 209694534

Start: 1069145

End: 1071484

Strand: Reverse

Name: 209694534

Synonym: VSAL_I0969

Alternate gene names: NA

Gene position: 1071484-1069145 (Counterclockwise)

Preceding gene: 209694535

Following gene: 209694533

Centisome position: 32.22

GC content: 34.66

Gene sequence:

>2340_bases
ATGAATTCCTCAACACTTAAGAGCTTATCCAAATTAGAAGTCATACGCTCTAGCAAATACTTTGAATGGTTAAACTCTAT
CGCAAGAACACACATCAATGATGACTCCTATCGCAATAGAGTTTTAAATATTTATGCAGCCTATATTTACATAACAGAAC
CCAAACCCTATTCATTCTCAGGAACGAATATATTAAATAACAGTCATGCAATAAATGAACACCTTCAATTACTGATTGGA
TTTATCTATTCAGAAATAAGCTTCGGAACCAGAGCAAAATATGACCATACAAGATACGTATATGCGATATTTTCCACTAT
AGCGAGTAACTTACAGCTAAGCTTATCTAGCATTGATATTAAAAAAAGTAGAATTAGCGATGATATAACGCAATATATAG
TTGAATATAATGATCTAGACCTTAATCAAGGTAAGTTGAACTACCTCAATGGCTGGCAAATTAAATCAAAAGAAGGGGCA
GTTTTAGAAGTCAATCTTGACTCAATTTTTTGCCAGTATGGCTCTAACTTTACTGAAAAAATTCATCATGCATTACAAAA
TTATGGACTAAAACACAAATCTGCAACATTAAAAAGCACTACATCCGCTCTTTGTTATCACTTATTGTACTTTTTCACCC
TCAATAAAAATCAATCACTTAAAGAGCTCTATATCAAATTATCTGCTAGAAATGTTCAACATTACTTTGCTGAGATTATG
GATATAGGTTTTGCTAGAGCCAAAATTGAAGGTCACGATGAAAACACTTTTTATATTCTCTGGAATCGAGCGATCCAAAC
CTATATTGTATGTTTTATTAAAATCGGTTTTTTTGAAGCTCCTATTAAACCTTTCTTAACTCCTAAATGGAAAAAACCTG
TTAATGAAAACTTATCATTCAGCATTGGTGGTAAGACAACGGAAAATGAAGCTGAACGTTGGTTTAGTAATATAGGTCTA
CACATCAAAGACGAAGAGGCAGTAGCCGAAATTCAATATCGACTCAATAAAGATTTAAACTATATTCACTTAGTATGCAC
ACATATTTTTGAGCAAGTAAAAGCCATTAATATCCGTAATAAGAAATACCTTCTCGCGGGTAAGATTAAACCTCTAAAAA
AACTAACACATAACGATCAATGCCCTATTGGTCCAGAAAATCTTGAAAACACCATAGCCACATTTTTCCATCACGGTATT
GGAGGAAAACATAATGCCTATAGTAGTTTTTTAGGATTTGTAGGCAATACTCCTCTCCTTACCAAAGAACTAGCACTCCC
TACCCTTTTAACATTGAACGCAATTCTATCTCTATTGATTTTAAATCATCCCAAAATTACACCTAGTTGGCTTCAAGAGT
GGGAGCTGCTTGACAAAAAAGGGAATAGATCTGGTTACAAACAGGTTGGGGACCAATGGATGATTATATCCCTCAAAAAT
CGAAGAGGAGCAACTCTTGCACAACAAGAGGTTGTTCTTAATAAGAAATCTAAGGAGATAGTTGATTTTTTAATCGAACA
TACTCTTTTGGCGAGAGAGCGATTAAAGGCTCTCGGTGATGCTAACTGGCGAAAAATGATCATCACCGCCACACCAAGTA
AAGTAGCTACATATAAAAGCTTAGGCTCCAGCTTGTCCTGCGATATTTCTTTTTACGAAACCTTAAGAAACTATAAAAAC
TTACCTCATGGACACATACTTAATCAAAACGATGTTAATGCTATTTCTGAAATATTTTCACTACGTTCACTTCGCCGCCA
CCGGGGCTTACAAATCTATCTTGAAACAGAATCCATGGGGGCTGTTGCAAGAGCATTAGGACATAAAAGAGTCCAATTAC
ATTTGCTAGAAGGCGTTTACCTACCTAAGCCTCTTATGGATTTTTTCCTTGAGCGCATTATACGTCAATTTCAAAACTCC
ATTTTATTTGAAGCAATGAAAGAGTCTCAGTACCTCTTAGATGCTGTCGATATATCAGAAGGAAATATCACCGAGTTTCT
TGAACATCATGGTATCAGCGACATTCCTTTCTATCTAGGGAACAGTGCGAATACACAAACAAAAGTAAAAGATATAGTTC
TTTCTTTTGATGGTATCGTATTCACTATCAGTACAGCATTGTTGCAATTGCTTATTGCGATAAAAACAACAGTTGAAACA
GCAATTGAAGATACACAATTTAAAGAGATTGTCGAACATTGGTATCAATGCGCGTTATTTATTCTATTATCTTTAGAAAC
AGACCAATACAATGAAGAAGATGATTATAAAAATATGCTAGAAAATGCTAGGGCGAACCCAATGGATAATAATAGAATCA
TGGGAGCGTTAATATGCTAA

Upstream 100 bases:

>100_bases
AAATAAAGAAAAAAGAATAAGTAGAATACCCGAAACTTAATTGACAGTTATCAATCGTCTACATATGCTTTTATTATGTA
CAATTATTTAAGTGATATGC

Downstream 100 bases:

>100_bases
AACCTCATTTAAAGCTAATAGAAGATATAAAATCAGAAGAACGTACATTTTCCTCTCTTTCTAAATTCGAACTTGAAGAA
ATGTATAAAATTTCAATTGC

Product: phage protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 779; Mature: 779

Protein sequence:

>779_residues
MNSSTLKSLSKLEVIRSSKYFEWLNSIARTHINDDSYRNRVLNIYAAYIYITEPKPYSFSGTNILNNSHAINEHLQLLIG
FIYSEISFGTRAKYDHTRYVYAIFSTIASNLQLSLSSIDIKKSRISDDITQYIVEYNDLDLNQGKLNYLNGWQIKSKEGA
VLEVNLDSIFCQYGSNFTEKIHHALQNYGLKHKSATLKSTTSALCYHLLYFFTLNKNQSLKELYIKLSARNVQHYFAEIM
DIGFARAKIEGHDENTFYILWNRAIQTYIVCFIKIGFFEAPIKPFLTPKWKKPVNENLSFSIGGKTTENEAERWFSNIGL
HIKDEEAVAEIQYRLNKDLNYIHLVCTHIFEQVKAINIRNKKYLLAGKIKPLKKLTHNDQCPIGPENLENTIATFFHHGI
GGKHNAYSSFLGFVGNTPLLTKELALPTLLTLNAILSLLILNHPKITPSWLQEWELLDKKGNRSGYKQVGDQWMIISLKN
RRGATLAQQEVVLNKKSKEIVDFLIEHTLLARERLKALGDANWRKMIITATPSKVATYKSLGSSLSCDISFYETLRNYKN
LPHGHILNQNDVNAISEIFSLRSLRRHRGLQIYLETESMGAVARALGHKRVQLHLLEGVYLPKPLMDFFLERIIRQFQNS
ILFEAMKESQYLLDAVDISEGNITEFLEHHGISDIPFYLGNSANTQTKVKDIVLSFDGIVFTISTALLQLLIAIKTTVET
AIEDTQFKEIVEHWYQCALFILLSLETDQYNEEDDYKNMLENARANPMDNNRIMGALIC

Sequences:

>Translated_779_residues
MNSSTLKSLSKLEVIRSSKYFEWLNSIARTHINDDSYRNRVLNIYAAYIYITEPKPYSFSGTNILNNSHAINEHLQLLIG
FIYSEISFGTRAKYDHTRYVYAIFSTIASNLQLSLSSIDIKKSRISDDITQYIVEYNDLDLNQGKLNYLNGWQIKSKEGA
VLEVNLDSIFCQYGSNFTEKIHHALQNYGLKHKSATLKSTTSALCYHLLYFFTLNKNQSLKELYIKLSARNVQHYFAEIM
DIGFARAKIEGHDENTFYILWNRAIQTYIVCFIKIGFFEAPIKPFLTPKWKKPVNENLSFSIGGKTTENEAERWFSNIGL
HIKDEEAVAEIQYRLNKDLNYIHLVCTHIFEQVKAINIRNKKYLLAGKIKPLKKLTHNDQCPIGPENLENTIATFFHHGI
GGKHNAYSSFLGFVGNTPLLTKELALPTLLTLNAILSLLILNHPKITPSWLQEWELLDKKGNRSGYKQVGDQWMIISLKN
RRGATLAQQEVVLNKKSKEIVDFLIEHTLLARERLKALGDANWRKMIITATPSKVATYKSLGSSLSCDISFYETLRNYKN
LPHGHILNQNDVNAISEIFSLRSLRRHRGLQIYLETESMGAVARALGHKRVQLHLLEGVYLPKPLMDFFLERIIRQFQNS
ILFEAMKESQYLLDAVDISEGNITEFLEHHGISDIPFYLGNSANTQTKVKDIVLSFDGIVFTISTALLQLLIAIKTTVET
AIEDTQFKEIVEHWYQCALFILLSLETDQYNEEDDYKNMLENARANPMDNNRIMGALIC
>Mature_779_residues
MNSSTLKSLSKLEVIRSSKYFEWLNSIARTHINDDSYRNRVLNIYAAYIYITEPKPYSFSGTNILNNSHAINEHLQLLIG
FIYSEISFGTRAKYDHTRYVYAIFSTIASNLQLSLSSIDIKKSRISDDITQYIVEYNDLDLNQGKLNYLNGWQIKSKEGA
VLEVNLDSIFCQYGSNFTEKIHHALQNYGLKHKSATLKSTTSALCYHLLYFFTLNKNQSLKELYIKLSARNVQHYFAEIM
DIGFARAKIEGHDENTFYILWNRAIQTYIVCFIKIGFFEAPIKPFLTPKWKKPVNENLSFSIGGKTTENEAERWFSNIGL
HIKDEEAVAEIQYRLNKDLNYIHLVCTHIFEQVKAINIRNKKYLLAGKIKPLKKLTHNDQCPIGPENLENTIATFFHHGI
GGKHNAYSSFLGFVGNTPLLTKELALPTLLTLNAILSLLILNHPKITPSWLQEWELLDKKGNRSGYKQVGDQWMIISLKN
RRGATLAQQEVVLNKKSKEIVDFLIEHTLLARERLKALGDANWRKMIITATPSKVATYKSLGSSLSCDISFYETLRNYKN
LPHGHILNQNDVNAISEIFSLRSLRRHRGLQIYLETESMGAVARALGHKRVQLHLLEGVYLPKPLMDFFLERIIRQFQNS
ILFEAMKESQYLLDAVDISEGNITEFLEHHGISDIPFYLGNSANTQTKVKDIVLSFDGIVFTISTALLQLLIAIKTTVET
AIEDTQFKEIVEHWYQCALFILLSLETDQYNEEDDYKNMLENARANPMDNNRIMGALIC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89408; Mature: 89408

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSTLKSLSKLEVIRSSKYFEWLNSIARTHINDDSYRNRVLNIYAAYIYITEPKPYSFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEEEEEECCCCCCCC
GTNILNNSHAINEHLQLLIGFIYSEISFGTRAKYDHTRYVYAIFSTIASNLQLSLSSIDI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHH
KKSRISDDITQYIVEYNDLDLNQGKLNYLNGWQIKSKEGAVLEVNLDSIFCQYGSNFTEK
HHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEECCCCCEEEEEHHHHHHHHCCCHHHH
IHHALQNYGLKHKSATLKSTTSALCYHLLYFFTLNKNQSLKELYIKLSARNVQHYFAEIM
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DIGFARAKIEGHDENTFYILWNRAIQTYIVCFIKIGFFEAPIKPFLTPKWKKPVNENLSF
HCCHHEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
SIGGKTTENEAERWFSNIGLHIKDEEAVAEIQYRLNKDLNYIHLVCTHIFEQVKAINIRN
EECCCCCHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
KKYLLAGKIKPLKKLTHNDQCPIGPENLENTIATFFHHGIGGKHNAYSSFLGFVGNTPLL
CEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH
TKELALPTLLTLNAILSLLILNHPKITPSWLQEWELLDKKGNRSGYKQVGDQWMIISLKN
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECC
RRGATLAQQEVVLNKKSKEIVDFLIEHTLLARERLKALGDANWRKMIITATPSKVATYKS
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
LGSSLSCDISFYETLRNYKNLPHGHILNQNDVNAISEIFSLRSLRRHRGLQIYLETESMG
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHH
AVARALGHKRVQLHLLEGVYLPKPLMDFFLERIIRQFQNSILFEAMKESQYLLDAVDISE
HHHHHHCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEECCC
GNITEFLEHHGISDIPFYLGNSANTQTKVKDIVLSFDGIVFTISTALLQLLIAIKTTVET
CCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AIEDTQFKEIVEHWYQCALFILLSLETDQYNEEDDYKNMLENARANPMDNNRIMGALIC
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MNSSTLKSLSKLEVIRSSKYFEWLNSIARTHINDDSYRNRVLNIYAAYIYITEPKPYSFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEEEEEEECCCCCCCC
GTNILNNSHAINEHLQLLIGFIYSEISFGTRAKYDHTRYVYAIFSTIASNLQLSLSSIDI
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHHHHH
KKSRISDDITQYIVEYNDLDLNQGKLNYLNGWQIKSKEGAVLEVNLDSIFCQYGSNFTEK
HHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEEEECCCCCEEEEEHHHHHHHHCCCHHHH
IHHALQNYGLKHKSATLKSTTSALCYHLLYFFTLNKNQSLKELYIKLSARNVQHYFAEIM
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DIGFARAKIEGHDENTFYILWNRAIQTYIVCFIKIGFFEAPIKPFLTPKWKKPVNENLSF
HCCHHEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
SIGGKTTENEAERWFSNIGLHIKDEEAVAEIQYRLNKDLNYIHLVCTHIFEQVKAINIRN
EECCCCCHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
KKYLLAGKIKPLKKLTHNDQCPIGPENLENTIATFFHHGIGGKHNAYSSFLGFVGNTPLL
CEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH
TKELALPTLLTLNAILSLLILNHPKITPSWLQEWELLDKKGNRSGYKQVGDQWMIISLKN
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECC
RRGATLAQQEVVLNKKSKEIVDFLIEHTLLARERLKALGDANWRKMIITATPSKVATYKS
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
LGSSLSCDISFYETLRNYKNLPHGHILNQNDVNAISEIFSLRSLRRHRGLQIYLETESMG
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHH
AVARALGHKRVQLHLLEGVYLPKPLMDFFLERIIRQFQNSILFEAMKESQYLLDAVDISE
HHHHHHCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEECCC
GNITEFLEHHGISDIPFYLGNSANTQTKVKDIVLSFDGIVFTISTALLQLLIAIKTTVET
CCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AIEDTQFKEIVEHWYQCALFILLSLETDQYNEEDDYKNMLENARANPMDNNRIMGALIC
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA