| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694523
Identifier: 209694523
GI number: 209694523
Start: 1053388
End: 1053621
Strand: Direct
Name: 209694523
Synonym: VSAL_I0956
Alternate gene names: NA
Gene position: 1053388-1053621 (Clockwise)
Preceding gene: 209694522
Following gene: 209694524
Centisome position: 31.68
GC content: 38.46
Gene sequence:
>234_bases ATGAATACTTTTCTAATTACGTTTGGTGTTTTTCTTACTGTTATTGGTGCAATGGCTATTGGTTATATTGTACAACGTAA AGTAGTGAAAGGCAGTTGTGGTGGCCTTGGTTCTGTTGGGATAGATAAAGTGTGTAACTGTCCAGAACCTTGTGATGCAC GAAAAAAACGTGAAGCTAAAGAAATCATTCGAGCTGAAAAACTAGCTGCATGGGAAAAAGATCGCATCGCGTAA
Upstream 100 bases:
>100_bases AACATAACATTCCTGTTTTCATGATTGTGAAAACTAAAAATGGCTTTAAAGAACTCTCTTCTGAAGCCTTTAAGCCTTTT TTGAAATAAGTGAGTAGATA
Downstream 100 bases:
>100_bases GTTTTTTACTCTATAACTATCTTAAAACAGCATCTTTATAGATGCTGTTTTTTATTGTAAAAAAATCATTTCATCGCTAT TATTTAACTGTGTATTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Na(+)-Translocating NADH-Quinone Reductase Subunit E; Conserved Membrane; Exported Protein
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAKEIIRAEKLAAWEKDRIA
Sequences:
>Translated_77_residues MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAKEIIRAEKLAAWEKDRIA >Mature_77_residues MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAKEIIRAEKLAAWEKDRIA
Specific function: Unknown
COG id: COG2991
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8386; Mature: 8386
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHH EIIRAEKLAAWEKDRIA HHHHHHHHHHHHHCCCC >Mature Secondary Structure MNTFLITFGVFLTVIGAMAIGYIVQRKVVKGSCGGLGSVGIDKVCNCPEPCDARKKREAK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHH EIIRAEKLAAWEKDRIA HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA