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The map label for this gene is nqrE

Identifier: 209694520

GI number: 209694520

Start: 1050321

End: 1050917

Strand: Direct

Name: nqrE

Synonym: VSAL_I0953

Alternate gene names: 209694520

Gene position: 1050321-1050917 (Clockwise)

Preceding gene: 209694519

Following gene: 209694521

Centisome position: 31.59

GC content: 38.69

Gene sequence:

>597_bases
ATGGAACATTATATTAGTTTGCTTGTAAAATCGATCTTCATCGAGAACATGGCACTTTCATTTTTCTTAGGTATGTGTAC
GTTTCTTGCCGTATCTAAAAAAGTAAAGACGTCATTTGGTCTTGGTGTTGCAGTAGTTGTTGTACTGACTCTTGCTGTGC
CTTTAAATAACTTGGTTTATACCTACTTATTAAAAGATGGCGCGCTAGTAGAAGGTGTGGATTTAAGTTTCCTTAACTTC
ATAACTTTCATCGGTGTTATTGCCGCTCTTGTACAAATCTTAGAAATGGTTTTAGACCGTTTCTTCCCACCTTTGTACAA
TGCATTAGGTATCTTCCTTCCGTTAATCACAGTTAACTGTGCAATTTTCGGTGGTGTATCTTTCATGGTACAACGTGACT
ATAACTTCACTGAATCGATCGTATACGGATTTGGTTCTGGTGTTGGTTGGATGTTAGCTATCGTGGCACTTGCGGGTATT
CGTGAGAAAATGAAATATTCAGATGTACCTCCAGGTCTTCGTGGCCTAGGTATTACTTTCATTACAGTAGGTTTGATGGC
GTTAGGCTTTATGTCTTTCTCTGGTGTTCAACTGTAG

Upstream 100 bases:

>100_bases
ATGTTACTAGCACCATCAGCATTCTTCTTAATTGGTTTTATGATTTGGGCTATCCGTATCTTTAAGCCTGAACAAGTAGA
AGCGAAGGAGTAAGGTCGAA

Downstream 100 bases:

>100_bases
GGTAAGCACCCAATTATAAGGAATAAAAAATGCAAAGCATTATTCTTGGTGTAGCGATGTTTACCATTATTGTATTAATT
TTAGTATTAGTGATTTTATT

Product: Na(+)-translocating NADH-quinone reductase subunit E

Products: NA

Alternate protein names: Na(+)-NQR subunit E; Na(+)-translocating NQR subunit E; NQR complex subunit E; NQR-1 subunit E

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGVAVVVVLTLAVPLNNLVYTYLLKDGALVEGVDLSFLNF
ITFIGVIAALVQILEMVLDRFFPPLYNALGIFLPLITVNCAIFGGVSFMVQRDYNFTESIVYGFGSGVGWMLAIVALAGI
REKMKYSDVPPGLRGLGITFITVGLMALGFMSFSGVQL

Sequences:

>Translated_198_residues
MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGVAVVVVLTLAVPLNNLVYTYLLKDGALVEGVDLSFLNF
ITFIGVIAALVQILEMVLDRFFPPLYNALGIFLPLITVNCAIFGGVSFMVQRDYNFTESIVYGFGSGVGWMLAIVALAGI
REKMKYSDVPPGLRGLGITFITVGLMALGFMSFSGVQL
>Mature_198_residues
MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGVAVVVVLTLAVPLNNLVYTYLLKDGALVEGVDLSFLNF
ITFIGVIAALVQILEMVLDRFFPPLYNALGIFLPLITVNCAIFGGVSFMVQRDYNFTESIVYGFGSGVGWMLAIVALAGI
REKMKYSDVPPGLRGLGITFITVGLMALGFMSFSGVQL

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG2209

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family

Homologues:

Organism=Escherichia coli, GI1787914, Length=196, Percent_Identity=43.3673469387755, Blast_Score=150, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NQRE_ALISL (B6EIC7)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002262448.1
- GeneID:   6988910
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I0953
- HOGENOM:   HBG624915
- OMA:   FLGMCSF
- ProtClustDB:   PRK02830
- HAMAP:   MF_00429
- InterPro:   IPR003667
- InterPro:   IPR010967
- PIRSF:   PIRSF006102
- TIGRFAMs:   TIGR01940

Pfam domain/function: PF02508 Rnf-Nqr

EC number: NA

Molecular weight: Translated: 21536; Mature: 21536

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1d713a54)-; HASH(0x1f6eb504)-; HASH(0x1f2b2984)-; HASH(0x1dd78be0)-; HASH(0x1eb5b154)-; HASH(0x1efc6000)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGVAVVVVLTLAVPLNNLVY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
TYLLKDGALVEGVDLSFLNFITFIGVIAALVQILEMVLDRFFPPLYNALGIFLPLITVNC
HHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AIFGGVSFMVQRDYNFTESIVYGFGSGVGWMLAIVALAGIREKMKYSDVPPGLRGLGITF
HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ITVGLMALGFMSFSGVQL
HHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGVAVVVVLTLAVPLNNLVY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
TYLLKDGALVEGVDLSFLNFITFIGVIAALVQILEMVLDRFFPPLYNALGIFLPLITVNC
HHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AIFGGVSFMVQRDYNFTESIVYGFGSGVGWMLAIVALAGIREKMKYSDVPPGLRGLGITF
HHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ITVGLMALGFMSFSGVQL
HHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA