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The map label for this gene is rpmE2

Identifier: 209694466

GI number: 209694466

Start: 991733

End: 991990

Strand: Reverse

Name: rpmE2

Synonym: VSAL_I0890

Alternate gene names: 209694466

Gene position: 991990-991733 (Counterclockwise)

Preceding gene: 209694469

Following gene: 209694465

Centisome position: 29.83

GC content: 37.21

Gene sequence:

>258_bases
ATGAAAGAAGGCATTCATCCAACATACAGAAAGGTTCTTTTTCACGATACGAGTGTTAATAAATATTTTCTTATCGGGTC
AACATTACAAACAGACAGAACGATGAAATGGGAAGATGGAAAGGAATACCCTTACATGACATTGGATATCTCTTCTGAAT
CACACCCATTTTATACGGGTGAACAAAGAGTGGTTTCTACGGAAGGACGAGTTGCAAACTTCAATCGTCGATTTGGTGCA
TTAAAAGGTAAGGTATAA

Upstream 100 bases:

>100_bases
TAATGAATCGTCACTTTTTTACTTTATATGATAATAGTTCGCAATTGCTAATTGTTATGTTATAACATAACAATTAGTGG
CGATTTATAGGGAGAGAAAA

Downstream 100 bases:

>100_bases
TGAAAGTATTAAGCTCATTGAAAAGTGCTAAATCTCGACATAAAGACTGTCAAATCGTAAAGCGAAAGGGGCGAGTCTTT
GTTATTTGTAAAACAAACCC

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKEGIHPTYRKVLFHDTSVNKYFLIGSTLQTDRTMKWEDGKEYPYMTLDISSESHPFYTGEQRVVSTEGRVANFNRRFGA
LKGKV

Sequences:

>Translated_85_residues
MKEGIHPTYRKVLFHDTSVNKYFLIGSTLQTDRTMKWEDGKEYPYMTLDISSESHPFYTGEQRVVSTEGRVANFNRRFGA
LKGKV
>Mature_85_residues
MKEGIHPTYRKVLFHDTSVNKYFLIGSTLQTDRTMKWEDGKEYPYMTLDISSESHPFYTGEQRVVSTEGRVANFNRRFGA
LKGKV

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=79, Percent_Identity=62.0253164556962, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_ALISL (B6EHZ6)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002262394.1
- GeneID:   6986710
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I0890
- HOGENOM:   HBG610087
- OMA:   YRTVLFH
- ProtClustDB:   PRK01678
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9893; Mature: 9893

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEGIHPTYRKVLFHDTSVNKYFLIGSTLQTDRTMKWEDGKEYPYMTLDISSESHPFYTG
CCCCCCCCCEEEEEECCCCCEEEEECCEECCCCEEECCCCCCCCEEEEEECCCCCCEECC
EQRVVSTEGRVANFNRRFGALKGKV
CCEEEECCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MKEGIHPTYRKVLFHDTSVNKYFLIGSTLQTDRTMKWEDGKEYPYMTLDISSESHPFYTG
CCCCCCCCCEEEEEECCCCCEEEEECCEECCCCEEECCCCCCCCEEEEEECCCCCCEECC
EQRVVSTEGRVANFNRRFGALKGKV
CCEEEECCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA