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The map label for this gene is rpmJ

Identifier: 209694465

GI number: 209694465

Start: 991596

End: 991733

Strand: Reverse

Name: rpmJ

Synonym: VSAL_I0889

Alternate gene names: 209694465

Gene position: 991733-991596 (Counterclockwise)

Preceding gene: 209694466

Following gene: 209694461

Centisome position: 29.83

GC content: 34.78

Gene sequence:

>138_bases
ATGAAAGTATTAAGCTCATTGAAAAGTGCTAAATCTCGACATAAAGACTGTCAAATCGTAAAGCGAAAGGGGCGAGTCTT
TGTTATTTGTAAAACAAACCCTCGATTTAAAGCGGTTCAAGGAAAGAAGAAAAAGTAA

Upstream 100 bases:

>100_bases
AATCACACCCATTTTATACGGGTGAACAAAGAGTGGTTTCTACGGAAGGACGAGTTGCAAACTTCAATCGTCGATTTGGT
GCATTAAAAGGTAAGGTATA

Downstream 100 bases:

>100_bases
GACATAAAAAAGGTTGGCAGTGATGCCAACCTTTTTAGGTTTGATTGCGTTAAAAGAGGGGTTACCAACCTTTAACTACG
CCACCTTTAAATGTTTTTAG

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 45

Protein sequence:

>45_residues
MKVLSSLKSAKSRHKDCQIVKRKGRVFVICKTNPRFKAVQGKKKK

Sequences:

>Translated_45_residues
MKVLSSLKSAKSRHKDCQIVKRKGRVFVICKTNPRFKAVQGKKKK
>Mature_45_residues
MKVLSSLKSAKSRHKDCQIVKRKGRVFVICKTNPRFKAVQGKKKK

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

Organism=Escherichia coli, GI87081713, Length=45, Percent_Identity=80, Blast_Score=78, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_ALISL (B6EHZ5)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002262393.1
- GeneID:   6988800
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I0889
- HOGENOM:   HBG734088
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 5186; Mature: 5186

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLSSLKSAKSRHKDCQIVKRKGRVFVICKTNPRFKAVQGKKKK
CCHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCEECCCCCCCC
>Mature Secondary Structure
MKVLSSLKSAKSRHKDCQIVKRKGRVFVICKTNPRFKAVQGKKKK
CCHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA