The gene/protein map for NC_011312 is currently unavailable.
Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694449

Identifier: 209694449

GI number: 209694449

Start: 974411

End: 975142

Strand: Reverse

Name: 209694449

Synonym: VSAL_I0873

Alternate gene names: NA

Gene position: 975142-974411 (Counterclockwise)

Preceding gene: 209694450

Following gene: 209694448

Centisome position: 29.33

GC content: 42.21

Gene sequence:

>732_bases
ATGATCGTGTCACACAATGAATTAGTAGCGGTAACTAATAAGGCATTCTTAGGCATGCGCCGAACGTGCGGAGAAGCCGA
TGTTATTGCCAATATGGTGGCAGATCTGCAAATGGTTGGGTTGAATGGCGTCAGACATTTTAATAATTCGACCAAATTTT
TAACGGTTGAGGAGGATTGTCCTGTCGAAATAACCATGAGCAAATCAGGTAATTTAGTGGTGGATTTACACGGTTGCAGT
GTGGCTTGCCATTTACCTGTGATTGTTGATTACGCGGTTGAAAAAATGGTGAAACGTAAACGCTTAAGCATCACATTAAC
CAAATGTCATAACCGTTGGCTCGCCTACAGTGAGTTGGTGAAGTTGGCAGCAAAAGGCATCGCTTGTAAAGCCGAGTGGG
AAAATGGCACTAGCCCTAAACGGACCTTGTATGTTTTAAATCGAGGGTGTGTATCACCTGAATTGTTTTTGTCAGATGAC
GTTGAGCTCAACAGTGGAAAATTAAATGACATGACCATTGAATTATCAGTACGAGATTTTGATGTGGTTGCTTTATCTGA
AGGGTACAGCATTCATATTAATTCGGCTGAGCTGAATGGATCACAAGAAAATGCATGGAGTCATGGCATTCAGGTTGATG
ATGCTGATTGGGAAAGTTTGAAAAAAACAGCGACCGCTATTTTAGTCGAAAACAGTGAGCAATCGTTAAAAGGTGCGGGA
GAGCTAGCCTGA

Upstream 100 bases:

>100_bases
GCTGGGTTCGAGTTACTTTTTTTCAAGGCGCGCCTTTGTTAGATGAAGTTCATGATGGGGAATGGTTATTCCCGTTATTG
CCAAATGCAGGAGAAGGCCA

Downstream 100 bases:

>100_bases
AACCATACATAGTTAACGATTAAGATGACAACGCTCATGGTGAAAACGATGGGCGTTTTTTATACTATTGACTCAGTAGT
AAAATGAATGCAAAGTACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MIVSHNELVAVTNKAFLGMRRTCGEADVIANMVADLQMVGLNGVRHFNNSTKFLTVEEDCPVEITMSKSGNLVVDLHGCS
VACHLPVIVDYAVEKMVKRKRLSITLTKCHNRWLAYSELVKLAAKGIACKAEWENGTSPKRTLYVLNRGCVSPELFLSDD
VELNSGKLNDMTIELSVRDFDVVALSEGYSIHINSAELNGSQENAWSHGIQVDDADWESLKKTATAILVENSEQSLKGAG
ELA

Sequences:

>Translated_243_residues
MIVSHNELVAVTNKAFLGMRRTCGEADVIANMVADLQMVGLNGVRHFNNSTKFLTVEEDCPVEITMSKSGNLVVDLHGCS
VACHLPVIVDYAVEKMVKRKRLSITLTKCHNRWLAYSELVKLAAKGIACKAEWENGTSPKRTLYVLNRGCVSPELFLSDD
VELNSGKLNDMTIELSVRDFDVVALSEGYSIHINSAELNGSQENAWSHGIQVDDADWESLKKTATAILVENSEQSLKGAG
ELA
>Mature_243_residues
MIVSHNELVAVTNKAFLGMRRTCGEADVIANMVADLQMVGLNGVRHFNNSTKFLTVEEDCPVEITMSKSGNLVVDLHGCS
VACHLPVIVDYAVEKMVKRKRLSITLTKCHNRWLAYSELVKLAAKGIACKAEWENGTSPKRTLYVLNRGCVSPELFLSDD
VELNSGKLNDMTIELSVRDFDVVALSEGYSIHINSAELNGSQENAWSHGIQVDDADWESLKKTATAILVENSEQSLKGAG
ELA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26654; Mature: 26654

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSHNELVAVTNKAFLGMRRTCGEADVIANMVADLQMVGLNGVRHFNNSTKFLTVEEDC
CEECCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEECCCCCEEEEECCCC
PVEITMSKSGNLVVDLHGCSVACHLPVIVDYAVEKMVKRKRLSITLTKCHNRWLAYSELV
CEEEEECCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHH
KLAAKGIACKAEWENGTSPKRTLYVLNRGCVSPELFLSDDVELNSGKLNDMTIELSVRDF
HHHHCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCEECCCCCEEEEEEEEEEEE
DVVALSEGYSIHINSAELNGSQENAWSHGIQVDDADWESLKKTATAILVENSEQSLKGAG
EEEEECCCCEEEEECCCCCCCCCCHHHCCEEECCCCHHHHHHHEEEEEEECCHHHHCCCC
ELA
CCC
>Mature Secondary Structure
MIVSHNELVAVTNKAFLGMRRTCGEADVIANMVADLQMVGLNGVRHFNNSTKFLTVEEDC
CEECCCCEEEEECHHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEECCCCCEEEEECCCC
PVEITMSKSGNLVVDLHGCSVACHLPVIVDYAVEKMVKRKRLSITLTKCHNRWLAYSELV
CEEEEECCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHH
KLAAKGIACKAEWENGTSPKRTLYVLNRGCVSPELFLSDDVELNSGKLNDMTIELSVRDF
HHHHCCCEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCEECCCCCEEEEEEEEEEEE
DVVALSEGYSIHINSAELNGSQENAWSHGIQVDDADWESLKKTATAILVENSEQSLKGAG
EEEEECCCCEEEEECCCCCCCCCCHHHCCEEECCCCHHHHHHHEEEEEEECCHHHHCCCC
ELA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA