| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is znuA [H]
Identifier: 209694431
GI number: 209694431
Start: 948604
End: 949497
Strand: Direct
Name: znuA [H]
Synonym: VSAL_I0852
Alternate gene names: 209694431
Gene position: 948604-949497 (Clockwise)
Preceding gene: 209694428
Following gene: 209694432
Centisome position: 28.53
GC content: 37.02
Gene sequence:
>894_bases ATGAGTAAAAAAAATCAATTTATTGCCTTATGTTTATGTACATTGCTAAGCGCTCAAGCTCAAGCAATGAACGTGTTGTC ATCAGTGAAACCGATTAACCTAATCGTGCAAGAACTGACAAATGGCGTATCGGAATCCTCTTACTTGGTTCCACAAAGTG CTTCTCCACATGATTATGCATTACGTCCTTCTGACATTAAAAAAATAAAAAATGCCGATATGATCATTTGGTACGGAAAT GATTTAGAACCTTTCCTAAGTAAAGTGTTAGCGGACCAAAAAAATGTCATCACCATCAGTGAATTTAGTTCGGTTGATTT TTATCACTTTGACCAACATGGGGATGACGCTCATGCCGAAGAAAGCGGGCACCATCACAATACTGATCCGCATTTTTGGT TAGGCCCAAAAGAAGCTTTGGGTGTAGCAAAAGAGATAACGGTTCAATTGATTAAAATTGATCCATTGAATAAAGACCAA TATAAGTCTAATCTTGCAGCCTTTGAAAATAAGTTAGCACAGGCTGTGGAGACTATTTCAAAGCAATTAAAACCAGTGCA GAGTAAAGGCTACTTTGTTTTTCATGACGCATATGGTTATTTTGAACGTTATTTTGGAATGAATAACTTGGGGCACTTTA CGGTGAGTCCGGATAGAAAACCGGGTGCAAAAACTTTGATTAATATAAAAAAATCACTTTTAAATCAACAAGCGGTATGT GTTTTTTCTGAACCTCAGTTTGAACCGGCAATTGTGACTACAATTACCAGAGGAACAGAAGTGCATAAAGGGGAACTTGA TCCTTTAGCCATACAGCAAGCGGATGAAAATGGGGCTTATTTTATATTTCTATCAACCATCAGTAATGAGTTATCACGTT GTCTAAGTCAATAA
Upstream 100 bases:
>100_bases TAAAGTAGTCATTTTAAAATAAGAGTCGTTTGCAATTAGTAAGTGTTATAATGTAACATTTTAGAAATCCAACCGCCATC ACATTTTTTAAGAGAAGAAA
Downstream 100 bases:
>100_bases AATATAAAAAAGCCATCGCGGCTAAAGTAGGTACATTATCAAAAAGACATAAGTTTATTTTATTGTCTTTATCTCTGTTT ACCTGCGTTATCTTAATTTG
Product: high-affinity zinc uptake system protein ZnuA precursor
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSKKNQFIALCLCTLLSAQAQAMNVLSSVKPINLIVQELTNGVSESSYLVPQSASPHDYALRPSDIKKIKNADMIIWYGN DLEPFLSKVLADQKNVITISEFSSVDFYHFDQHGDDAHAEESGHHHNTDPHFWLGPKEALGVAKEITVQLIKIDPLNKDQ YKSNLAAFENKLAQAVETISKQLKPVQSKGYFVFHDAYGYFERYFGMNNLGHFTVSPDRKPGAKTLINIKKSLLNQQAVC VFSEPQFEPAIVTTITRGTEVHKGELDPLAIQQADENGAYFIFLSTISNELSRCLSQ
Sequences:
>Translated_297_residues MSKKNQFIALCLCTLLSAQAQAMNVLSSVKPINLIVQELTNGVSESSYLVPQSASPHDYALRPSDIKKIKNADMIIWYGN DLEPFLSKVLADQKNVITISEFSSVDFYHFDQHGDDAHAEESGHHHNTDPHFWLGPKEALGVAKEITVQLIKIDPLNKDQ YKSNLAAFENKLAQAVETISKQLKPVQSKGYFVFHDAYGYFERYFGMNNLGHFTVSPDRKPGAKTLINIKKSLLNQQAVC VFSEPQFEPAIVTTITRGTEVHKGELDPLAIQQADENGAYFIFLSTISNELSRCLSQ >Mature_296_residues SKKNQFIALCLCTLLSAQAQAMNVLSSVKPINLIVQELTNGVSESSYLVPQSASPHDYALRPSDIKKIKNADMIIWYGND LEPFLSKVLADQKNVITISEFSSVDFYHFDQHGDDAHAEESGHHHNTDPHFWLGPKEALGVAKEITVQLIKIDPLNKDQY KSNLAAFENKLAQAVETISKQLKPVQSKGYFVFHDAYGYFERYFGMNNLGHFTVSPDRKPGAKTLINIKKSLLNQQAVCV FSEPQFEPAIVTTITRGTEVHKGELDPLAIQQADENGAYFIFLSTISNELSRCLSQ
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG4531
COG function: function code P; ABC-type Zn2+ transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=288, Percent_Identity=39.9305555555556, Blast_Score=234, Evalue=7e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 33207; Mature: 33076
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKNQFIALCLCTLLSAQAQAMNVLSSVKPINLIVQELTNGVSESSYLVPQSASPHDYA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCC LRPSDIKKIKNADMIIWYGNDLEPFLSKVLADQKNVITISEFSSVDFYHFDQHGDDAHAE CCHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCCCCCC ESGHHHNTDPHFWLGPKEALGVAKEITVQLIKIDPLNKDQYKSNLAAFENKLAQAVETIS CCCCCCCCCCCEEECCHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH KQLKPVQSKGYFVFHDAYGYFERYFGMNNLGHFTVSPDRKPGAKTLINIKKSLLNQQAVC HHHCCCCCCCEEEEECHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEE VFSEPQFEPAIVTTITRGTEVHKGELDPLAIQQADENGAYFIFLSTISNELSRCLSQ EECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHCC >Mature Secondary Structure SKKNQFIALCLCTLLSAQAQAMNVLSSVKPINLIVQELTNGVSESSYLVPQSASPHDYA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCCCCCC LRPSDIKKIKNADMIIWYGNDLEPFLSKVLADQKNVITISEFSSVDFYHFDQHGDDAHAE CCHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCCCCCCC ESGHHHNTDPHFWLGPKEALGVAKEITVQLIKIDPLNKDQYKSNLAAFENKLAQAVETIS CCCCCCCCCCCEEECCHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH KQLKPVQSKGYFVFHDAYGYFERYFGMNNLGHFTVSPDRKPGAKTLINIKKSLLNQQAVC HHHCCCCCCCEEEEECHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEE VFSEPQFEPAIVTTITRGTEVHKGELDPLAIQQADENGAYFIFLSTISNELSRCLSQ EECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]