| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is pgm [H]
Identifier: 209694418
GI number: 209694418
Start: 932983
End: 934629
Strand: Direct
Name: pgm [H]
Synonym: VSAL_I0839
Alternate gene names: 209694418
Gene position: 932983-934629 (Clockwise)
Preceding gene: 209694417
Following gene: 209694419
Centisome position: 28.06
GC content: 39.22
Gene sequence:
>1647_bases ATGGCTATACATCCTCGCGCTGGGCAAAAAGCTCAGCAAGAAGATTTACACAATATCCCAGTATTAGTTGCTAATTATTT TTTATTAGAGCCAAACCCAGCTAATGCCGATCAGAAAGTGCAATTTGGTACTTCTGGACACCGTGGAACGGCGGATAAAT CAACGTTTAATCAGCATCATATTTGGGCAATTGCTCAAGCGGTTGTTGATGTTCGTAAAGCGAATGGAGTGACTGGTCCT CTGTTTTTAGGGAAAGATACTCACGCATTATCTGAACCTGCATTTACGTCTGCAATTGAAGTATTTGTTGCAAATGGCGT TGAAGTTATTATTCAAGAGAATAATGGCTACACTCCGACCCCTGGTATTTCGCATGCAATTTTAACGCATAATGTTAAAT TTGATGAGAAAGCTGATGGTATTGTGATTACACCTTCTCATAACCCACCTCAAGATGGCGGCATTAAATATAATCCTGTT CATGGAGGACCGGCAGAAGGTGAGCTGACGACAGCCATTGAAAATCGTGCGAATCAATTGATTGCGAATGAATTAAAAGA AGTTAAACGCGTTTCTATAACAGAGGCAATGGCTTCTGATCTTGTTAAGCAAATTGACTTAGTTCAACCGTATATTGATG ATCTGAAAAATGTGATTAATATTGAAGCGATTCAAAAAGCAAATTTAAAATTAGGTGTGGATCCACTTGGCGGTTCTGGC ATTGAATATTGGCGTCAAATTGGTCAGGCGTTTGAACTTGATTTGACTCTTGTGAGTGAAGCTATCGATCCGTCATTCCA GTTTATGTCGTTAGATAAAGACGGTGTAGTTCGTATGGACTGTTCTTCACCTTATGCAATGGCTGGATTATTATCATTAA AAGATGATTATGATTTAGCGTTCGGTAATGATCCTGATTATGATCGCCATGGTATTGTTACACCATCAGGACTAATGAAC CCAAACCATTACCTTGCAGTATGTATTGATTATTTATATCAAAATCGACCTCAGTGGAAAAGCGAAGTTGCTGTAGGTAA AACTCTCGTTTCTTCAGCTATTATTGATAAGGTTGTGGCTGATTTAGGCCGTGATTTATGTGAAGTTCCTGTTGGTTTTA AGTGGTTTGTTGATGGTTTATACAATGGGACACTAGGCTTTGGTGGTGAAGAAAGTGCAGGTGCTTCTTTCTTACGTTTT GATGGTACACCATGGTCAACAGATAAAGATGGTATTCTTTTGTGTCTACTTGCTGCTGAAATTACAGCAATAACTGGTAT GAACCCGCAAGAATATTATAATAAACTTGCTGCTCAACACGGTGAATCAAGTTATAACCGTATTCAAGCGGTTGCGAATA AAGAACAAAAAGCGGTATTAAGTAAACTCTCTCCAGAGATGGTGTCTGCAACAACATTAGCAGGTGATGAGATTACTGCA CGTTTAACGCATGCTCCTGGTAACGGTGCTGCGATTGGTGGTTTGAAAGTAACAACGGCGAATGGTTGGTTTGCTGCACG CCCATCTGGAACTGAAGAGATTTATAAAATTTACTGCGAAAGTTTTAAAGGTGCTGATCATTTGGCATTGATTGAGCAAG AAGCACAAGAAATTGTAAGTAATGTATTTAAAGACGCTGGATTATAG
Upstream 100 bases:
>100_bases ACGTATGGGTTTCCAACATGACTTAACAGAAAAAGTGTGCGCGGCGATTTAATTTTTTGAGTTAGCACTCAAATCATAAT TTGTCACAAGGAATCGTCAA
Downstream 100 bases:
>100_bases TGGTCTAGTATAATTTCAGTAAAATGTTAATAAAAAAAGCAGCGCATGTCGCTGCTTTTTTTATTTTAAATATAGGGACG TGATAGTGAATAATTTTCAG
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MAIHPRAGQKAQQEDLHNIPVLVANYFLLEPNPANADQKVQFGTSGHRGTADKSTFNQHHIWAIAQAVVDVRKANGVTGP LFLGKDTHALSEPAFTSAIEVFVANGVEVIIQENNGYTPTPGISHAILTHNVKFDEKADGIVITPSHNPPQDGGIKYNPV HGGPAEGELTTAIENRANQLIANELKEVKRVSITEAMASDLVKQIDLVQPYIDDLKNVINIEAIQKANLKLGVDPLGGSG IEYWRQIGQAFELDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLSLKDDYDLAFGNDPDYDRHGIVTPSGLMN PNHYLAVCIDYLYQNRPQWKSEVAVGKTLVSSAIIDKVVADLGRDLCEVPVGFKWFVDGLYNGTLGFGGEESAGASFLRF DGTPWSTDKDGILLCLLAAEITAITGMNPQEYYNKLAAQHGESSYNRIQAVANKEQKAVLSKLSPEMVSATTLAGDEITA RLTHAPGNGAAIGGLKVTTANGWFAARPSGTEEIYKIYCESFKGADHLALIEQEAQEIVSNVFKDAGL
Sequences:
>Translated_548_residues MAIHPRAGQKAQQEDLHNIPVLVANYFLLEPNPANADQKVQFGTSGHRGTADKSTFNQHHIWAIAQAVVDVRKANGVTGP LFLGKDTHALSEPAFTSAIEVFVANGVEVIIQENNGYTPTPGISHAILTHNVKFDEKADGIVITPSHNPPQDGGIKYNPV HGGPAEGELTTAIENRANQLIANELKEVKRVSITEAMASDLVKQIDLVQPYIDDLKNVINIEAIQKANLKLGVDPLGGSG IEYWRQIGQAFELDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLSLKDDYDLAFGNDPDYDRHGIVTPSGLMN PNHYLAVCIDYLYQNRPQWKSEVAVGKTLVSSAIIDKVVADLGRDLCEVPVGFKWFVDGLYNGTLGFGGEESAGASFLRF DGTPWSTDKDGILLCLLAAEITAITGMNPQEYYNKLAAQHGESSYNRIQAVANKEQKAVLSKLSPEMVSATTLAGDEITA RLTHAPGNGAAIGGLKVTTANGWFAARPSGTEEIYKIYCESFKGADHLALIEQEAQEIVSNVFKDAGL >Mature_547_residues AIHPRAGQKAQQEDLHNIPVLVANYFLLEPNPANADQKVQFGTSGHRGTADKSTFNQHHIWAIAQAVVDVRKANGVTGPL FLGKDTHALSEPAFTSAIEVFVANGVEVIIQENNGYTPTPGISHAILTHNVKFDEKADGIVITPSHNPPQDGGIKYNPVH GGPAEGELTTAIENRANQLIANELKEVKRVSITEAMASDLVKQIDLVQPYIDDLKNVINIEAIQKANLKLGVDPLGGSGI EYWRQIGQAFELDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLSLKDDYDLAFGNDPDYDRHGIVTPSGLMNP NHYLAVCIDYLYQNRPQWKSEVAVGKTLVSSAIIDKVVADLGRDLCEVPVGFKWFVDGLYNGTLGFGGEESAGASFLRFD GTPWSTDKDGILLCLLAAEITAITGMNPQEYYNKLAAQHGESSYNRIQAVANKEQKAVLSKLSPEMVSATTLAGDEITAR LTHAPGNGAAIGGLKVTTANGWFAARPSGTEEIYKIYCESFKGADHLALIEQEAQEIVSNVFKDAGL
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI133922562, Length=409, Percent_Identity=24.9388753056235, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI290463102, Length=440, Percent_Identity=24.0909090909091, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI21361621, Length=440, Percent_Identity=23.8636363636364, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI1786904, Length=546, Percent_Identity=69.2307692307692, Blast_Score=792, Evalue=0.0, Organism=Caenorhabditis elegans, GI17535441, Length=437, Percent_Identity=27.6887871853547, Blast_Score=93, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6323752, Length=574, Percent_Identity=25.609756097561, Blast_Score=97, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6322722, Length=490, Percent_Identity=27.1428571428571, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI17864244, Length=430, Percent_Identity=26.2790697674419, Blast_Score=101, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 59246; Mature: 59115
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHPRAGQKAQQEDLHNIPVLVANYFLLEPNPANADQKVQFGTSGHRGTADKSTFNQHH CCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCHHH IWAIAQAVVDVRKANGVTGPLFLGKDTHALSEPAFTSAIEVFVANGVEVIIQENNGYTPT HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC PGISHAILTHNVKFDEKADGIVITPSHNPPQDGGIKYNPVHGGPAEGELTTAIENRANQL CCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH IANELKEVKRVSITEAMASDLVKQIDLVQPYIDDLKNVINIEAIQKANLKLGVDPLGGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCH IEYWRQIGQAFELDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLSLKDDYDLA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHCCCCCCCEE FGNDPDYDRHGIVTPSGLMNPNHYLAVCIDYLYQNRPQWKSEVAVGKTLVSSAIIDKVVA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DLGRDLCEVPVGFKWFVDGLYNGTLGFGGEESAGASFLRFDGTPWSTDKDGILLCLLAAE HHCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHH ITAITGMNPQEYYNKLAAQHGESSYNRIQAVANKEQKAVLSKLSPEMVSATTLAGDEITA HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHCCHHHHHHHEECCCCEEE RLTHAPGNGAAIGGLKVTTANGWFAARPSGTEEIYKIYCESFKGADHLALIEQEAQEIVS EEEECCCCCEEECCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH NVFKDAGL HHHHHCCC >Mature Secondary Structure AIHPRAGQKAQQEDLHNIPVLVANYFLLEPNPANADQKVQFGTSGHRGTADKSTFNQHH CCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCHHH IWAIAQAVVDVRKANGVTGPLFLGKDTHALSEPAFTSAIEVFVANGVEVIIQENNGYTPT HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC PGISHAILTHNVKFDEKADGIVITPSHNPPQDGGIKYNPVHGGPAEGELTTAIENRANQL CCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH IANELKEVKRVSITEAMASDLVKQIDLVQPYIDDLKNVINIEAIQKANLKLGVDPLGGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCH IEYWRQIGQAFELDLTLVSEAIDPSFQFMSLDKDGVVRMDCSSPYAMAGLLSLKDDYDLA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHCCCCCCCEE FGNDPDYDRHGIVTPSGLMNPNHYLAVCIDYLYQNRPQWKSEVAVGKTLVSSAIIDKVVA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH DLGRDLCEVPVGFKWFVDGLYNGTLGFGGEESAGASFLRFDGTPWSTDKDGILLCLLAAE HHCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHH ITAITGMNPQEYYNKLAAQHGESSYNRIQAVANKEQKAVLSKLSPEMVSATTLAGDEITA HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHCCHHHHHHHEECCCCEEE RLTHAPGNGAAIGGLKVTTANGWFAARPSGTEEIYKIYCESFKGADHLALIEQEAQEIVS EEEECCCCCEEECCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH NVFKDAGL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8083177; 8905232; 9278503; 8011018 [H]