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The map label for this gene is ybgI [C]

Identifier: 209694419

GI number: 209694419

Start: 934715

End: 935470

Strand: Direct

Name: ybgI [C]

Synonym: VSAL_I0840

Alternate gene names: 209694419

Gene position: 934715-935470 (Clockwise)

Preceding gene: 209694418

Following gene: 209694421

Centisome position: 28.11

GC content: 36.38

Gene sequence:

>756_bases
GTGAATAATTTTCAGTTAGAAACAGTACTAAATAATGAATTAAAGCCTCAATTAATTAAAGACTATTGCCCAAATGGACT
TCAAGTTGAAGGTAAAAATGAAGTAAAGAAAATTATTACAGGTGTAACTGCTTCTCAAGCACTTATTGACGCTGCGATAG
AGTATAAAGCAGATGCATTATTAGTTCATCATGGCTACTTCTGGAAGGGCGAAAATGAGTCAATTAAAGGGATGAAAGGG
AATCGTATTCGTTCTTTAATTAAAAATGACATTAATTTATTTGCTTACCATCTTCCTTTAGATATACACCCAACACTTGG
TAATAATGCGGAGTTAGCTCGTTTATTTTCAATTATAAATGTTGAAGGGCTAGAGCCAACGCCTCAATCCATAGCAATGA
AAGGAGAGTTTGACGTTGCATTATCTGGCGAAGATCTTAGTTTAAGAATCAGCCAAATATTGAATAGAGAGCCCTTACAC
ATTACCCCTGATGTTAATAAAAATATTAAAACAGTGGCTTGGTGCTCCGGTGGAGGTCAAGATTATATTGAGTTGGCGGC
AGAGCAGGGGATAGATGCGTTTATATCAGGAGAAATATCTGAAAGAACGACTTATATCGCACGTGAATTAGGCATTCATT
ATTTTGCAGCTGGTCATCATGCAACGGAACGTTATGGAGTTAAAGCTCTTGGTGAGTGGTTGGTAAGAGAGCACGGATTT
GACGTTAAATTTATTGATATTGATAACCCAGTATAG

Upstream 100 bases:

>100_bases
GACGCTGGATTATAGTGGTCTAGTATAATTTCAGTAAAATGTTAATAAAAAAAGCAGCGCATGTCGCTGCTTTTTTTATT
TTAAATATAGGGACGTGATA

Downstream 100 bases:

>100_bases
GCATTTACTTATGGATTCATTATTTGATGTTATTTAAATTAAATCAGAATAAAAAAGGTTGATGCTAACGCATCAACCTT
TTTATTTAAGAGATAGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNNFQLETVLNNELKPQLIKDYCPNGLQVEGKNEVKKIITGVTASQALIDAAIEYKADALLVHHGYFWKGENESIKGMKG
NRIRSLIKNDINLFAYHLPLDIHPTLGNNAELARLFSIINVEGLEPTPQSIAMKGEFDVALSGEDLSLRISQILNREPLH
ITPDVNKNIKTVAWCSGGGQDYIELAAEQGIDAFISGEISERTTYIARELGIHYFAAGHHATERYGVKALGEWLVREHGF
DVKFIDIDNPV

Sequences:

>Translated_251_residues
MNNFQLETVLNNELKPQLIKDYCPNGLQVEGKNEVKKIITGVTASQALIDAAIEYKADALLVHHGYFWKGENESIKGMKG
NRIRSLIKNDINLFAYHLPLDIHPTLGNNAELARLFSIINVEGLEPTPQSIAMKGEFDVALSGEDLSLRISQILNREPLH
ITPDVNKNIKTVAWCSGGGQDYIELAAEQGIDAFISGEISERTTYIARELGIHYFAAGHHATERYGVKALGEWLVREHGF
DVKFIDIDNPV
>Mature_251_residues
MNNFQLETVLNNELKPQLIKDYCPNGLQVEGKNEVKKIITGVTASQALIDAAIEYKADALLVHHGYFWKGENESIKGMKG
NRIRSLIKNDINLFAYHLPLDIHPTLGNNAELARLFSIINVEGLEPTPQSIAMKGEFDVALSGEDLSLRISQILNREPLH
ITPDVNKNIKTVAWCSGGGQDYIELAAEQGIDAFISGEISERTTYIARELGIHYFAAGHHATERYGVKALGEWLVREHGF
DVKFIDIDNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=250, Percent_Identity=53.2, Blast_Score=275, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27951; Mature: 27951

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFQLETVLNNELKPQLIKDYCPNGLQVEGKNEVKKIITGVTASQALIDAAIEYKADAL
CCCEEEEEECCCCCCHHHHHHHCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
LVHHGYFWKGENESIKGMKGNRIRSLIKNDINLFAYHLPLDIHPTLGNNAELARLFSIIN
EEECCEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEECEEECCCCCCCHHHHHHHHHHC
VEGLEPTPQSIAMKGEFDVALSGEDLSLRISQILNREPLHITPDVNKNIKTVAWCSGGGQ
CCCCCCCHHHEEECCCEEEEECCCCCEEHHHHHHCCCCEEECCCCCCCCEEEEEECCCCH
DYIELAAEQGIDAFISGEISERTTYIARELGIHYFAAGHHATERYGVKALGEWLVREHGF
HHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCC
DVKFIDIDNPV
CEEEEECCCCC
>Mature Secondary Structure
MNNFQLETVLNNELKPQLIKDYCPNGLQVEGKNEVKKIITGVTASQALIDAAIEYKADAL
CCCEEEEEECCCCCCHHHHHHHCCCCCEECCHHHHHHHHHCCCHHHHHHHHHHHHCCCEE
LVHHGYFWKGENESIKGMKGNRIRSLIKNDINLFAYHLPLDIHPTLGNNAELARLFSIIN
EEECCEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEEECEEECCCCCCCHHHHHHHHHHC
VEGLEPTPQSIAMKGEFDVALSGEDLSLRISQILNREPLHITPDVNKNIKTVAWCSGGGQ
CCCCCCCHHHEEECCCEEEEECCCCCEEHHHHHHCCCCEEECCCCCCCCEEEEEECCCCH
DYIELAAEQGIDAFISGEISERTTYIARELGIHYFAAGHHATERYGVKALGEWLVREHGF
HHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCC
DVKFIDIDNPV
CEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]